DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mAChR-A and hrh4.g3

DIOPT Version :10

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:XP_031760458.1 Gene:hrh4.g3 / 101734215 XenbaseID:XB-GENE-22168496 Length:296 Species:Xenopus tropicalis


Alignment Length:324 Identity:92/324 - (28%)
Similarity:154/324 - (47%) Gaps:44/324 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 YPGTTLLTALFENLTSTAASGLYDPYSGMYGNQTNGTIGFETKGPRYSLASMVVMGFVAAILSTV 117
            ||....|..| :|::.:|.|.         .||:. .|..|.:     |...|:|..|..:..| 
 Frog     4 YPRNASLVHL-DNISVSAVSA---------SNQSQ-EITDEMR-----LIQAVLMSCVICVTGT- 51

  Fly   118 TVAGNVMVMISFKIDKQLQTISNYFLFSLAIADFAIGAISMPLFAVTTIL-GYWPLGPIVCDTWL 181
               ||.:|::.|.::|.|:|.|||||.:|||.||..|.:|:|||....|: |.|.||..||...|
 Frog    52 ---GNALVILGFLVNKNLRTPSNYFLLNLAIGDFLTGTVSLPLFLQNYIISGGWVLGKHVCKLLL 113

  Fly   182 ALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTNRAAVM-IGAAWGISLLLWPPWIYSWPY 245
            .:|......::.|:::|||||:.:||:.:.|:.::...:.|.| :.|.|.::.|.:.|.|..|.|
 Frog   114 TMDSTLCQCTIYNIVLISFDRFLAVTKAVKYQDQQKNIKLAFMKMAAVWIVAFLNFGPAIILWEY 178

  Fly   246 IEGKRTVPKDECYIQFIETNQYITFGTALAAFYFPVTIMCFLYWRIWRETKKRQKDLPNLQAGKK 310
            ..|...||..|||.:|..|..|:.: :::..|:.|:|.:.:....|:...:.|.|:...:.:...
 Frog   179 FVGYSVVPDGECYPEFYYTTNYLLY-SSIFDFFTPMTAIAYFNLSIYFNIRSRMKNKTCISSVSA 242

  Fly   311 DSSKRSNSSDENTVV------NHASGGLLAFAQVGGNDHDTWRRPRSESSP-DAESVYMTNMVI 367
            .:.|:    |:|..|      ||          |||....:.:.|.::... ..::.|.|.:.:
 Frog   243 SNLKK----DDNVFVDSTINSNH----------VGGMKEKSTKHPSNKIEDFQIKAAYTTPVTV 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tmA_mAChR_DM1-like 105..>300 CDD:320428 67/196 (34%)
TM helix 1 106..132 CDD:320428 7/25 (28%)
TM helix 2 139..165 CDD:320428 15/25 (60%)
TM helix 3 177..207 CDD:320428 9/29 (31%)
TM helix 4 219..242 CDD:320428 7/23 (30%)
TM helix 5 265..294 CDD:320428 5/28 (18%)
7tm_GPCRs <707..783 CDD:475119
TM helix 6 716..738 CDD:410628
TM helix 7 751..776 CDD:410628
hrh4.g3XP_031760458.1 7tm_GPCRs 39..>239 CDD:475119 68/204 (33%)
TM helix 1 39..62 CDD:410628 8/26 (31%)
TM helix 2 71..93 CDD:410628 13/21 (62%)
TM helix 3 110..132 CDD:410628 4/21 (19%)
TM helix 4 156..172 CDD:410628 4/15 (27%)
TM helix 5 198..221 CDD:410628 4/23 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.