DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-A and LOC100498398

DIOPT Version :10

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:XP_002931741.2 Gene:LOC100498398 / 100498398 XenbaseID:XB-GENE-29084187 Length:456 Species:Xenopus tropicalis


Alignment Length:758 Identity:147/758 - (19%)
Similarity:246/758 - (32%) Gaps:340/758 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 PAGYSPGY-PGTTLLTALFENLTSTAASGLYDPYSGMYGNQTNGTIGFETKGPRYSLASMVVMGF 109
            |||..|.: .|..........|.:..|:||.:.....||              ::|.:..:::..
 Frog    10 PAGDMPAHLAGFNRSAGEVVQLGNACAAGLAEEQLQHYG--------------QFSSSVSIILAV 60

  Fly   110 VAAILSTVTVAGNVMVMISFKIDKQLQTISNYFLFSLAIADFAIGAISMPLFAVTTILGYWPLGP 174
            :.|::...||.||.:|:::|.::|.|:|..|:|..:||||||.:|...:||:....:.|.|..|.
 Frog    61 LMALMVLATVLGNALVILAFVVEKGLRTQGNFFFLNLAIADFLVGGFCIPLYIPYVLTGQWKFGK 125

  Fly   175 IVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTNRAAVM-IGAAWGISLLLWPP 238
            .:|..||.:|||...|||.|:::||:||:.|||:.::|||::...|.||: :...|..:.||:.|
 Frog   126 GLCKLWLVMDYLLCTASVFNIVLISYDRFISVTKAVSYRAQKGMTRNAVLKMLIVWVAAFLLYGP 190

  Fly   239 WIYSWPYIEGKRTVPKDECYIQFIETNQYITFGTALAAFYFP-VTIMCF---LYWRIWRETKKRQ 299
            .|.:|.||.....:|:.|||::|. .|.|.....:...|:.| :::..|   :|..|.|.|..|.
 Frog   191 AIITWEYIARTTILPEGECYVEFY-YNWYFLMIASTIEFFTPFISVTYFNLSIYINIKRRTMMRN 254

  Fly   300 KDLPNLQAGKKDSSKRSNSSDENTVVNHASGGLLAFAQVGGNDHDTWRRPRSESSPDAESVYMTN 364
            :::                                 ||  |.:|             .|..:.  
 Frog   255 EEM---------------------------------AQ--GQEH-------------CELTFQ-- 269

  Fly   365 MVIDSGYHGMHSRKSSIKSTNTIKKSYTCFGSIKEWCIAWWHSGREDSDDFAYEQEEPSDLGYAT 429
                                          |..||..|.:               .:|:|..|. 
 Frog   270 ------------------------------GKRKEHLIFF---------------VKPADRPYG- 288

  Fly   430 PVTIETPLQSSVSRCTSMNVMRDNYSMGGSVSGVRPPSILLSDVSPTPLPRPPLASISQLQEMSA 494
                                  :....||::|...|.::                          
 Frog   289 ----------------------EAKKQGGTLSPAMPSAV-------------------------- 305

  Fly   495 VTASTTANVNTSGNGNGA---------INNNNNASHNGNGAVNGNGAGNGSGIGLGTTGNATHRD 550
                          ||||         :|.|.:                                
 Frog   306 --------------GNGAQELESPMLDLNINQD-------------------------------- 324

  Fly   551 SRTLPVINRINSRSVSQDSVYTILIRLPSDGASSNAANGGGGGPGAGAAASASLSMQGDCAPSIK 615
               ||.:....|...|||..|.                         :|.:|..:|:.|.|.|| 
 Frog   325 ---LPPLQVEVSAKKSQDCFYK-------------------------SAENACSNMRPDMASSI- 360

  Fly   616 MIHEDGPTTTAAAAPLASAAATRRPLPSRDSEFSLPLGRRMSHAQHDARLLNAKVIPKQLGKAGG 680
                                                                             
 Frog   361 ----------------------------------------------------------------- 360

  Fly   681 GAAGGGVGGAHALMNARNAAKKKKKSQEKRQESKAAKTLSAILLSFIITWTPYNILVLIKPLTTC 745
                               |.:.:.|::||    .||:|:.|:..|.:.|.||.:|::|:  ..|
 Frog   361 -------------------ANRFRLSRDKR----VAKSLAIIVCVFGLCWAPYTLLMIIR--AAC 400

  Fly   746 -SDCIPTELWDFFYALCYINSTINPMCYALCNATFRRTYVRIL 787
             ..|:...|::..:.|.::||.|||:.|.||:.:||:.::::|
 Frog   401 HGRCVQDYLYEISFWLLWLNSAINPVLYPLCHMSFRKAFMKLL 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tmA_mAChR_DM1-like 105..>300 CDD:320428 70/199 (35%)
TM helix 1 106..132 CDD:320428 7/25 (28%)
TM helix 2 139..165 CDD:320428 11/25 (44%)
TM helix 3 177..207 CDD:320428 15/29 (52%)
TM helix 4 219..242 CDD:320428 8/23 (35%)
TM helix 5 265..294 CDD:320428 7/32 (22%)
7tm_GPCRs <707..783 CDD:475119 26/76 (34%)
TM helix 6 716..738 CDD:410628 9/21 (43%)
TM helix 7 751..776 CDD:410628 9/24 (38%)
LOC100498398XP_002931741.2 7tmA_Histamine_H3R 56..439 CDD:320423 134/692 (19%)
TM helix 1 57..83 CDD:320423 7/25 (28%)
TM helix 2 90..117 CDD:320423 11/26 (42%)
TM helix 3 128..158 CDD:320423 15/29 (52%)
TM helix 4 173..191 CDD:320423 5/17 (29%)
TM helix 5 216..246 CDD:320423 6/29 (21%)
TM helix 6 367..397 CDD:320423 12/33 (36%)
TM helix 7 407..432 CDD:320423 9/24 (38%)

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