DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-A and drd4

DIOPT Version :10

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:XP_002937535.2 Gene:drd4 / 100486482 XenbaseID:XB-GENE-990215 Length:414 Species:Xenopus tropicalis


Alignment Length:711 Identity:126/711 - (17%)
Similarity:209/711 - (29%) Gaps:348/711 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 MYGNQTNGTIGFETKGPRYSLASMVVMGFVAAILSTVTVAGNVMVMISFKIDKQLQTISNYFLFS 145
            |..|.:|.| ......|.|:..:: |.||   ||....:.|||:|.:|...:|.|:|.:|||:.|
 Frog    44 MVHNISNHT-SHSAVDPHYNFLAL-VFGF---ILIVCIICGNVLVCLSVCTEKALKTTTNYFIVS 103

  Fly   146 LAIADFAIGAISMPLFAVTTIL-GYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRP 209
            ||:||..:..:.:||:..|..: |.|.|..::||..:.:|.:...||:.||..||.||:.:|:.|
 Frog   104 LAVADLLLAVLVLPLYVYTEFVGGVWTLSLVLCDVLMTMDVMLCTASIFNLCAISVDRFIAVSIP 168

  Fly   210 LTYRAKRTTNRAAVMIGAAWGISLLLWPPWIYSWPYIEGKRTVPKDECYIQFIETNQYITFGTAL 274
            |.|..::..||...:|...|..:..:..|.|:      |...|...:..:..:|.|.||.: :::
 Frog   169 LNYNRRQVDNRQLFLISTTWIFAFAVASPVIF------GLNNVADRDPTMCKLEDNNYIVY-SSV 226

  Fly   275 AAFYFPVTIMCFLYWRIWRETKKRQKDLPNLQAGKKDSSKRSNSSDENTVVNHASGGLLAFAQVG 339
            .:|:.|..||..||..:                                                
 Frog   227 CSFFIPCPIMLVLYCAM------------------------------------------------ 243

  Fly   340 GNDHDTWRRPRSESSPDAESVYMTNMVIDSGYHGMHSRKSSIKSTNTIKKSYTCFGSIKEWCIAW 404
                                           :||                       :::|    
 Frog   244 -------------------------------FHG-----------------------LRKW---- 250

  Fly   405 WHSGREDSDDFAYEQEEPSDLGYATPVTIETPLQSSVSRCTSMNVMRDNYSMGGSVSGVRPPS-- 467
                           ||          |.:|.|:|.:|                  .|::||.  
 Frog   251 ---------------EE----------TRKTKLRSHMS------------------PGLKPPQCP 272

  Fly   468 ILLSDVSPTPLPRPPLASISQLQEMSAVTASTTANVNTSGNGNGAINNNNNASHNGNGAVNGNGA 532
            .||.|.|||.         |:|.|:                                        
 Frog   273 ALLLDRSPTD---------SKLDEL---------------------------------------- 288

  Fly   533 GNGSGIGLGTTGNATHRDSRTLPVINRINSRSVSQDSVYTILIRLPSDGASSNAANGGGGGPGAG 597
                                                                             
 Frog   289 ----------------------------------------------------------------- 288

  Fly   598 AAASASLSMQGDCAPSIKMIHEDGPTTTAAAAPLASAAATRRPLPSRDSEFSLPLGRRMSHAQHD 662
                 :|..|||| |..|...::|......|.|                           |.:: 
 Frog   289 -----NLYDQGDC-PFPKSYVDNGHGIQTVAYP---------------------------HLKY- 319

  Fly   663 ARLLNAKVIPKQLGKAGGGAAGGGVGGAHALMNARNAAKKKKKSQEKRQESKAAKTLSAILLSFI 727
                                             :.|...::|:::...:|.||.:.|..::.:|:
 Frog   320 ---------------------------------STNMEPERKQAKINGRERKAMRVLPVVVGAFL 351

  Fly   728 ITWTPYNILVLIKPLTTCSDC-IPTELWDFFYALCYINSTINPMCYALCNATFRRTYVRIL 787
            ..|||:.::.:.:.|  |..| ||.:|......|.|:||.:||:.|.:.|..||..:.::|
 Frog   352 FCWTPFFVVHITRAL--CESCYIPEQLISIVTWLGYVNSALNPVIYTIFNTEFRNYFRKVL 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tmA_mAChR_DM1-like 105..>300 CDD:320428 60/195 (31%)
TM helix 1 106..132 CDD:320428 10/25 (40%)
TM helix 2 139..165 CDD:320428 10/25 (40%)
TM helix 3 177..207 CDD:320428 11/29 (38%)
TM helix 4 219..242 CDD:320428 6/22 (27%)
TM helix 5 265..294 CDD:320428 9/28 (32%)
7tm_GPCRs <707..783 CDD:475119 24/76 (32%)
TM helix 6 716..738 CDD:410628 5/21 (24%)
TM helix 7 751..776 CDD:410628 8/24 (33%)
drd4XP_002937535.2 7tmA_D4_dopamine_R 63..406 CDD:320434 119/685 (17%)
TM helix 1 64..90 CDD:320434 10/29 (34%)
TM helix 2 97..123 CDD:320434 10/25 (40%)
TM helix 3 136..166 CDD:320434 11/29 (38%)
TM helix 4 178..201 CDD:320434 6/28 (21%)
TM helix 5 217..246 CDD:320434 9/108 (8%)
TM helix 6 334..364 CDD:320434 8/29 (28%)
TM helix 7 374..399 CDD:320434 8/24 (33%)

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