DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-A and chrm2

DIOPT Version :10

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:XP_002942846.2 Gene:chrm2 / 100485603 XenbaseID:XB-GENE-6034896 Length:470 Species:Xenopus tropicalis


Alignment Length:719 Identity:215/719 - (29%)
Similarity:300/719 - (41%) Gaps:276/719 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 NQTNGTIGFETKGPRYSLASMVVMGFVAAILSTVTVAGNVMVMISFKIDKQLQTISNYFLFSLAI 148
            :.||.|:    .|..|....:|.:..||..||.||:.||::||:|.|:::.|||::||||||||.
 Frog    10 SSTNETM----MGSPYKTVEVVFIVIVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLAC 70

  Fly   149 ADFAIGAISMPLFAVTTILGYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYR 213
            ||..||..||.|:.:.|::||||:||:|||.||||||:.|||||:|||||||||||.||:||||.
 Frog    71 ADLIIGVFSMNLYTLYTVIGYWPIGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYP 135

  Fly   214 AKRTTNRAAVMIGAAWGISLLLWPPWIYSWPYIEGKRTVPKDECYIQFIETNQYITFGTALAAFY 278
            .:|||..|.:||.|||.:|.:||.|.|..|.:|.|.||||:.||||||. :|..:|||||:||||
 Frog   136 VRRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGGRTVPEGECYIQFF-SNAAVTFGTAIAAFY 199

  Fly   279 FPVTIMCFLYWRIWRETKKRQKDLPNLQAGKKDSSKRSNSSDENTVVNHASGGLLAFAQVGGNDH 343
            .||.||..|||:|.|.:|.|      ::.|||                                 
 Frog   200 LPVIIMTVLYWQISRASKSR------IKKGKK--------------------------------- 225

  Fly   344 DTWRRPRSESSPDAESVYMTNMVIDSGYHGMHSRKSSIKSTNTIKKSYTCFGSIKEWCIAWWHSG 408
                    |::|:.:.:..:|                                            
 Frog   226 --------EAAPNQDPISPSN-------------------------------------------- 238

  Fly   409 REDSDDFAYEQEEPSDLGYATPVTIETPLQSSVSRCTSMNVMRDNYSMGGSVSGVRPPSILLSDV 473
                                        :|..:                     |:|        
 Frog   239 ----------------------------VQGKI---------------------VKP-------- 246

  Fly   474 SPTPLPRPPLASISQLQEMSAVTASTTANVNTSGNGNGAINNNNNASHNGNGAVNG---NG-AGN 534
                                                     ||||.:.|.:|..:|   || ..:
 Frog   247 -----------------------------------------NNNNVAANEDGLDHGKIQNGKVTS 270

  Fly   535 GSGIGLGTTGNATHRDSRTLPVINRINSRSVSQDSVYTILIRLPSDGASSNA--ANGGGGGPGAG 597
            .|||     .|....:.         ..:.:|.||....::....:||:.:.  |:|....|...
 Frog   271 NSGI-----ENCVQAEG---------EEKEISNDSTSVSVVNTKDEGAAKDVPQASGSQANPKTE 321

  Fly   598 AAASASL-----SMQGDCAPSIKMIHEDGPTTTAAAAPLASAAATRRPLPSRDSEFSLPLGRRMS 657
            .:....:     |.:|||:        :...||....|.|:                   ||...
 Frog   322 NSKLTCIRIVTKSPKGDCS--------NATGTTVEIVPGAN-------------------GRNGE 359

  Fly   658 HAQHDARLLNAKVIPKQLGKAGGGAAGGGVGGAHALMNARNAAKKKKKSQEKRQESKAAKTLSAI 722
            ..|:        ::.:::.|                |..:...||...|:||    |..:|:.||
 Frog   360 DKQN--------IVARKIVK----------------MTKQPPKKKLPPSREK----KVTRTILAI 396

  Fly   723 LLSFIITWTPYNILVLIKPLTTCSDCIPTELWDFFYALCYINSTINPMCYALCNATFRRTYVRIL 787
            ||:|||||||||::|||.  |.|:.|:|..:|...|.||||||||||.||||||.||::|:..:|
 Frog   397 LLAFIITWTPYNVMVLIN--TFCAVCVPNTVWTIGYWLCYINSTINPACYALCNTTFKKTFKHLL 459

  Fly   788 TCKW 791
            .|::
 Frog   460 MCQY 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tmA_mAChR_DM1-like 105..>300 CDD:320428 117/194 (60%)
TM helix 1 106..132 CDD:320428 12/25 (48%)
TM helix 2 139..165 CDD:320428 15/25 (60%)
TM helix 3 177..207 CDD:320428 24/29 (83%)
TM helix 4 219..242 CDD:320428 11/22 (50%)
TM helix 5 265..294 CDD:320428 18/28 (64%)
7tm_GPCRs <707..783 CDD:475119 44/75 (59%)
TM helix 6 716..738 CDD:410628 14/21 (67%)
TM helix 7 751..776 CDD:410628 16/24 (67%)
chrm2XP_002942846.2 7tmA_mAChR_M2 27..455 CDD:320424 207/688 (30%)
TM helix 1 28..54 CDD:320424 12/25 (48%)
TM helix 2 61..87 CDD:320424 15/25 (60%)
TM helix 3 99..129 CDD:320424 24/29 (83%)
TM helix 4 141..164 CDD:320424 11/22 (50%)
TM helix 5 186..215 CDD:320424 18/28 (64%)
TM helix 6 384..414 CDD:320424 20/33 (61%)
TM helix 7 423..448 CDD:320424 16/24 (67%)

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