DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mAChR-A and LOC100334962

DIOPT Version :9

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:XP_003200969.1 Gene:LOC100334962 / 100334962 -ID:- Length:455 Species:Danio rerio


Alignment Length:769 Identity:161/769 - (20%)
Similarity:260/769 - (33%) Gaps:342/769 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 TTTTSTTTTTAS-----PAGYSPGYPGTTLLTALFENLTSTAASGLYDPYSGMYGNQTNGTIGFE 93
            |..:|:....||     |...||.....|::|..     :|:.|              |||....
Zfish     3 TLLSSSAAGKASHDDFRPVAASPNVLDLTMVTCF-----NTSGS--------------NGTTVSP 48

  Fly    94 TKGPRYSLASMVVMGFVAAILSTVTVAGNVMVMISFKIDKQLQTISNYFLFSLAIADFAIGAISM 158
            .:.| :...:||::..:.|.|..|.|.||.:|:::|.:||.|:...|||..:|||:||.:||..:
Zfish    49 AEAP-FPGYTMVILAILMATLVVVVVVGNALVILAFVVDKSLRNQCNYFFLNLAISDFLVGAFCI 112

  Fly   159 PLFAVTTILGYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTNRAAV 223
            ||:....:.|.|.||..:|..||.:|||...|||.|:::||:||:.||||.:.|||::...|.||
Zfish   113 PLYMPYILTGRWMLGRGLCKLWLVMDYLLCTASVFNIVLISYDRFLSVTRAVRYRAQQGVTRLAV 177

  Fly   224 M-IGAAWGISLLLWPPWIYSWPYIEGKRTVPKDECYIQFIETNQYITFGTALAA----FYFPVTI 283
            : :.|.|..:.||:.|.|..|..:.|:..||:|||:.:|     |.|:...|:|    |:.|...
Zfish   178 LKMLAVWVSAFLLYGPAIIFWELLVGESIVPEDECFAEF-----YCTWYFLLSASTFEFFSPFIS 237

  Fly   284 MCFLYWRIWRETKKRQKD-LPNLQAGKKDSSKRSNSSDENTVVNHASGGLLAFAQVGGNDHDTWR 347
            :.|..:.|:...::|.:. :.:::|.|:|.                                 ||
Zfish   238 VAFFNFSIYLNIQRRNRSRMAHVEAEKEDG---------------------------------WR 269

  Fly   348 RPRSESSPDAESVYMTNMVIDSGYHGMHSRKSSIKSTNTIKKSYTCFGSIKEWCIAWWHSGREDS 412
                              |||       .:.||:....|.|.|                      
Zfish   270 ------------------VID-------GQTSSVFFVKTRKVS---------------------- 287

  Fly   413 DDFAYEQEEPSDLGYATPVTIETPLQSSVSRCTSMNVMRDNYSMGGSVSGVRPPSILLSDVSPTP 477
                  ..||                ::||.     |:.|:                 .:|||  
Zfish   288 ------SSEP----------------AAVSA-----VIEDD-----------------EEVSP-- 306

  Fly   478 LPRPPLASISQLQEMSAVTASTTANVNTSGNGNGAINNNNNASHNGNGAVNGNGAGNGSGIGLGT 542
                                      ::||:                                  
Zfish   307 --------------------------SSSGD---------------------------------- 311

  Fly   543 TGNATHRDSRTLPVINRINSRSVSQDSVYTILIRLPSDGASSNAANGGGGGPGAGAAASASLSMQ 607
             .::||..|.|:.  ..|..|.:....|.|.:||                          :..:.
Zfish   312 -PSSTHSVSLTMK--TTIKKRGLFGGWVRTRIIR--------------------------AQEVT 347

  Fly   608 GDCAPSIKMIHEDGPTTTAAAAPLASAAATRRPLPSRDSEFSLPLGRRMSHAQHDARLLNAKVIP 672
            ..|||.                                                           
Zfish   348 NPCAPC----------------------------------------------------------- 353

  Fly   673 KQLGKAGGGAAGGGVGGAHALMNARNAAKKKKKSQEKRQESKAAKTLSAILLSFIITWTPYNILV 737
                ::||          ||.::               ::.|.||:|:.|:..|.:.|.||.:|:
Zfish   354 ----RSGG----------HARLS---------------RDKKIAKSLAVIVCVFGVCWAPYTLLM 389

  Fly   738 LIKPLTTCS-DCIPTELWDFFYALCYINSTINPMCYALCNATFRRTYVRILTCK 790
            :|:  ..|| .|:....::..:.|.::||.|||..|.||:::|||.:.:||..|
Zfish   390 IIR--AACSGSCVEHHWYEVTFWLLWLNSAINPFLYPLCHSSFRRAFAKILCPK 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tm_4 117..>241 CDD:304433 54/124 (44%)
7tm_1 121..>314 CDD:278431 73/198 (37%)
LOC100334962XP_003200969.1 7tm_1 75..423 CDD:278431 131/657 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.