DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mAChR-A and LOC100331077

DIOPT Version :9

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:XP_002667517.2 Gene:LOC100331077 / 100331077 -ID:- Length:396 Species:Danio rerio


Alignment Length:708 Identity:134/708 - (18%)
Similarity:210/708 - (29%) Gaps:367/708 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 TKGPRYSLASMV--VMGFVAAILSTVT----------VAGNVMVMISFKIDKQLQTISNYFLFSL 146
            |:.|..|.|:.|  ..||...:|:.:|          |.||.:|:::||:||.|:..|||||.:|
Zfish    23 TREPAVSNATAVRRDAGFAGPVLALLTGMMVVLIALIVCGNALVIVAFKMDKSLRKQSNYFLLNL 87

  Fly   147 AIADFAIGAISMPLFAVTTILGYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLT 211
            ||:||.:||..:|::....:.|.|.||..:|..||.:|||...|||.|:::||:|||.|||:.::
Zfish    88 AISDFLVGAFCIPVYMPYILTGKWMLGKGLCKLWLVVDYLLCTASVFNIVLISYDRYLSVTKAVS 152

  Fly   212 YRAKR-TTNRAAVMIGAAWGISLLLWPPWIYSWPYIEGKRTVPKDECYIQFIETNQYITFGTALA 275
            ||||: .|:.|.:.|...|.::.||:.|.|..|..:.|:..||.|||:.:|..| .|.....::.
Zfish   153 YRAKQGMTHFAVLKIAVVWILAFLLYGPSILFWEQLTGRSRVPDDECFAEFYYT-WYFLLSASVI 216

  Fly   276 AFYFPVTIMCFLYWRIWRETKKRQKDLPNLQAGKKDSSKRSNSSDENTVVNHASGGLLAFAQVGG 340
            .|:.|...:.|....|:...::|       :.|.:..||..||:                     
Zfish   217 EFFVPFLSVAFFNISIYINIRRR-------RLGNRSESKCHNSA--------------------- 253

  Fly   341 NDHDTWRRPRSESSPDAESVYMTNMVIDSGYHGMHSRKSSIKSTNTIKKSYTCFGSIKEWCIAWW 405
                |..|.|:..|        |.|                           |:.|:        
Zfish   254 ----TLYRDRTHMS--------TRM---------------------------CWNSL-------- 271

  Fly   406 HSGREDSDDFAYEQEEPSDLGYATPVTIETPLQSSVSRCTSMNVMRDNYSMGGSVSGVRPPSILL 470
                                                                             
Zfish   272 ----------------------------------------------------------------- 271

  Fly   471 SDVSPTPLPRPPLASISQLQEMSAVTASTTANVNTSGNGNGAINNNNNASHNGNGAVNGNGAGNG 535
                                                     |:.|.:.                 
Zfish   272 -----------------------------------------ALKNKST----------------- 278

  Fly   536 SGIGLGTTGNATHRDSRTLPVINRINSRSVSQDSVYTILIRLPSDGASSNAANGGGGGPGAGAAA 600
                  |.|..                             |..|||                   
Zfish   279 ------TDGEK-----------------------------RPESDG------------------- 289

  Fly   601 SASLSMQGDCAPSIKMIHEDGPTTTAAAAPLASAAATRRPLPSRDSEFSLPLGRRMSHAQHDARL 665
               |||:  |....::                                                 
Zfish   290 ---LSMR--CVQRSRL------------------------------------------------- 300

  Fly   666 LNAKVIPKQLGKAGGGAAGGGVGGAHALMNARNAAKKKKKSQEKRQESKAAKTLSAILLSFIITW 730
                                                        ||:.|.||:|:.|:..|.:.|
Zfish   301 --------------------------------------------RQDKKIAKSLAIIVCVFAVCW 321

  Fly   731 TPYNILVLIKPLTTC-SDCIPTELWDFFYALCYINSTINPMCYALCNATFRRTYVRIL 787
            .||.:|::::  ..| .||:....::..:.|.::||.|||..|.||:::|||.:.:||
Zfish   322 APYTLLMIVR--AACRGDCVSQHWYEVTFWLLWLNSAINPFLYPLCHSSFRRAFFKIL 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tm_4 117..>241 CDD:304433 56/134 (42%)
7tm_1 121..>314 CDD:278431 71/193 (37%)
LOC100331077XP_002667517.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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