DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mAChR-A and chrm3b

DIOPT Version :9

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:XP_001919160.1 Gene:chrm3b / 100149598 ZFINID:ZDB-GENE-090410-5 Length:494 Species:Danio rerio


Alignment Length:794 Identity:231/794 - (29%)
Similarity:311/794 - (39%) Gaps:328/794 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MSLALAAHGPPSILEP-LFKTVTTSTTTTTTTTTSTTTTTASPAGYSPGYPGTTLLTALFENLTS 68
            |:|.|:|       || ||.| .:|........|:..:....||..|            ..|:|.
Zfish     1 MNLTLSA-------EPGLFLT-NSSPGMRANPVTAFMSHDLHPANDS------------LHNITQ 45

  Fly    69 TAASGLYDPYSGMYGNQTNGTIGFETKGPRYSLASMVVMGFVAAILSTVTVAGNVMVMISFKIDK 133
             ..|.|.||..|                  :|:..:|::..:...:|.:|:.||.:|::|||::|
Zfish    46 -IPSVLSDPLGG------------------HSVLQVVMIALLCGSISLLTIIGNTLVLLSFKLNK 91

  Fly   134 QLQTISNYFLFSLAIADFAIGAISMPLFAVTTILGYWPLGPIVCDTWLALDYLASNASVLNLLII 198
            ||:|::||:|.|||.||..||.:||.|:....|:..|.||...||.|||:||:||||||:|||:|
Zfish    92 QLKTVNNYYLLSLAFADLIIGVLSMNLYTTYIIMDQWALGNFACDLWLAIDYVASNASVMNLLVI 156

  Fly   199 SFDRYFSVTRPLTYRAKRTTNRAAVMIGAAWGISLLLWPPWIYSWPYIEGKRTVPKDECYIQFIE 263
            ||||||||||||||||||||.||..|||.||.||.:||.|.|..|.|..|:|||..|:|||||| 
Zfish   157 SFDRYFSVTRPLTYRAKRTTKRAMTMIGLAWSISFILWAPAILFWQYFVGERTVEPDKCYIQFI- 220

  Fly   264 TNQYITFGTALAAFYFPVTIMCFLYWRIWRETKKRQKDLPNLQAGKKDSSKRSNSSDENTVVNHA 328
            :....||.||:||||.|||||..|||||::||:.|.::|..|:|.       .|..:|:.||   
Zfish   221 SEPITTFCTAIAAFYLPVTIMTVLYWRIYKETENRSRELAGLKAS-------GNVEEESVVV--- 275

  Fly   329 SGGLLAFAQVGGNDHDTWRRPRSESSPDAESVYMTNMVIDSGYHGMHSRKSSIKSTNTIKKSYTC 393
                  ..|.|.:        ||.||.:.:..                  :.::.|.|.:.    
Zfish   276 ------VPQTGSS--------RSHSSYELQPA------------------APMRKTKTRRL---- 304

  Fly   394 FGSIKEWCIAWWHSG---REDSDDFAYEQEEPSDLGYATPVTIETPLQSSVSRCTSMNVMRDNYS 455
                  |   :|..|   |..||.:                                        
Zfish   305 ------W---FWSRGDVERSSSDSW---------------------------------------- 320

  Fly   456 MGGSVSGVRPPSILLSDVSPTPLPRPPLASISQLQEMSAVTASTTANVNTSGNGNGAINNNNNAS 520
                                                                      |||..| 
Zfish   321 ----------------------------------------------------------NNNETA- 326

  Fly   521 HNGNGAVNGNGAGNGSGIGLGTTGNATHRDSRTLPVINRINSRSVSQDSVYTILIRLPSDGASSN 585
                             |.:..:.:....|:                :.:|||            
Zfish   327 -----------------ISIDQSDDDEEEDA----------------EHIYTI------------ 346

  Fly   586 AANGGGGGPGAGAAASASLSMQGDCAPSIKMIHEDGPTTTAAAAPLASAAATRRPLPSRDSEFSL 650
                                                               .::.|.::.|:|.:
Zfish   347 ---------------------------------------------------EKQDLEAKPSKFGV 360

  Fly   651 PLGRRMSHAQHDARLLNAKVIPKQLGKAGGGAAGGGVGGAHALMNARNAAKKKKKSQEKRQESKA 715
                      ..:..|::|..|                    :.:||...|:||.|..|  |.||
Zfish   361 ----------SKSSTLDSKDQP--------------------VKSARKTNKRKKLSLVK--EKKA 393

  Fly   716 AKTLSAILLSFIITWTPYNILVLIKPLTTCSDCIPTELWDFFYALCYINSTINPMCYALCNATFR 780
            |:|||||||:||||||||||:||:...  |..|||..||...|.|||:|||:|||||||||..||
Zfish   394 AQTLSAILLAFIITWTPYNIMVLLNAF--CDGCIPETLWALGYWLCYVNSTVNPMCYALCNKAFR 456

  Fly   781 RTYVRILTCKWHTR 794
            .|:..||.|:|..:
Zfish   457 TTFRSILLCQWRKK 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tm_4 117..>241 CDD:304433 77/123 (63%)
7tm_1 121..>314 CDD:278431 114/192 (59%)
chrm3bXP_001919160.1 7tm_4 72..>244 CDD:304433 105/172 (61%)
7tm_1 79..448 CDD:278431 193/653 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 345 1.000 Domainoid score I1022
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 385 1.000 Inparanoid score I1990
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1245472at2759
OrthoFinder 1 1.000 - - FOG0001308
OrthoInspector 1 1.000 - - otm24829
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X324
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
99.070

Return to query results.
Submit another query.