DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-A and chrm4b

DIOPT Version :9

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:XP_001343971.2 Gene:chrm4b / 100004742 ZFINID:ZDB-GENE-090410-7 Length:451 Species:Danio rerio


Alignment Length:701 Identity:190/701 - (27%)
Similarity:256/701 - (36%) Gaps:301/701 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 PRYSLAS--MVVMGFVAAILSTVTVAGNVMVMISFKIDKQLQTISNYFLFSLAIADFAIGAISMP 159
            ||..|.|  ||::..:...:|.:||.|||:|::|.|:::.|:||:||||||||.:|..:|..||.
Zfish    40 PRRVLGSVGMVLIILLTGSISLLTVLGNVLVLLSIKVNRNLRTINNYFLFSLACSDLIVGVFSMN 104

  Fly   160 LFAVTTILGYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTNRAAVM 224
            |:.|..:.|||||||.:||.||.:||:.|||||:|||:|.|||||.|||||:|..|||...|..|
Zfish   105 LYIVYVVKGYWPLGPQMCDLWLVVDYVVSNASVMNLLLICFDRYFCVTRPLSYPTKRTARWAGAM 169

  Fly   225 IGAAWGISLLLWPPWIYSWPYIEGKRTVPKDECYIQFIETNQYITFGTALAAFYFPVTIMCFLYW 289
            |..||..|||||.|.|..|.....:..||:.:|||..: .|..:|..|.:.|||.||.||..||.
Zfish   170 ITVAWLQSLLLWAPAILLWQAGRDRSKVPEGQCYILLL-ANPAVTLATTIPAFYIPVIIMTVLYT 233

  Fly   290 RI----WRETKKRQKDLPNLQAGKKDSSKRSNSSDENTVVNHASGGLLAFAQVGGNDHDTWRRPR 350
            ||    .|:..|.:.:..||....|.|                                   |.:
Zfish   234 RISLASQRQVHKLKPESANLLYPSKTS-----------------------------------RVK 263

  Fly   351 SESSPDAESVYMTNMVIDSGYHGMHSRKSSIKSTNTIKKSYTCFGSIKEWCIAWWHSGREDSDDF 415
            |.::||.                          .|.||.. :|                      
Zfish   264 SLANPDL--------------------------VNDIKPC-SC---------------------- 279

  Fly   416 AYEQEEPSDLGYATPVTIETPLQSSVSRCTSMNVMRDNYSMGGSVSGVRPPSILLSDVSPTPLPR 480
                ::..||| .|......|         |:...:..|||..|           .|||      
Zfish   280 ----KQELDLG-RTKQLFSLP---------SVEFSKTEYSMDSS-----------PDVS------ 313

  Fly   481 PPLASISQLQEMSAVTASTTANVNTSGNGNGAINNNNNASHNGNGAVNGNGAGNGSGIGLGTTGN 545
                                                  |.|.|                      
Zfish   314 --------------------------------------AEHRG---------------------- 318

  Fly   546 ATHRDSRTLPVINRINSRSVSQDSVYTILIRLPSDGASSNAANGGGGGPGAGAAASASLSMQGDC 610
                                             .|..:|...|          :...:...|.||
Zfish   319 ---------------------------------LDAEASRLKN----------STETNRKTQADC 340

  Fly   611 APSIKMIHEDGPTTTAAAAPLASAAATRRPLPSRDSEFSLPLGRRMSHAQHDARLLNAKVIPKQL 675
            .                                 .:...:.:.|:.|:                 
Zfish   341 L---------------------------------QTNSGVQVQRQTSN----------------- 355

  Fly   676 GKAGGGAAGGGVGGAHALMNARNAAKKKKKSQEKRQESKAAKTLSAILLSFIITWTPYNILVLIK 740
                              |.::||.:|..:      |.|..||:.|:||:||||||||:::|||.
Zfish   356 ------------------MVSKNAKRKALR------ERKVTKTVLAVLLAFIITWTPYSVMVLIG 396

  Fly   741 PLTTCSDCIPTELWDFFYALCYINSTINPMCYALCNATFRRTYVRILTCKW 791
              |.|..|:|..||...|.|||:|||:||:|||||||||:||:.|:|.||:
Zfish   397 --TFCRWCVPEVLWMVGYFLCYVNSTVNPVCYALCNATFKRTFKRLLRCKF 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tm_4 117..>241 CDD:304433 72/123 (59%)
7tm_1 121..>314 CDD:278431 97/196 (49%)
chrm4bXP_001343971.2 7tm_4 58..>187 CDD:304433 74/128 (58%)
7tm_1 66..426 CDD:278431 166/654 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4220
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1245472at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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