DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and MCM1

DIOPT Version :10

Sequence 1:NP_726438.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_013757.1 Gene:MCM1 / 855060 SGDID:S000004646 Length:286 Species:Saccharomyces cerevisiae


Alignment Length:144 Identity:67/144 - (46%)
Similarity:92/144 - (63%) Gaps:26/144 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 KKSPPANGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHV 218
            ::..|.|..:.|.|.||::::|:||.||:.||||||.||||||:|||.||||||:|||.||||.|
Yeast     5 EEGTPTNNGQQKERRKIEIKFIENKTRRHVTFSKRKHGIMKKAFELSVLTGTQVLLLVVSETGLV 69

  Fly   219 YTFATRKLQPMITSEAGKQLIQTCLNSPDPPSVGGGDQRMSATGFEETELSYNIADEDSKDDRSP 283
            |||:|.|.:|::|.:.|:.|||.|||:||       |:       ||.|      :||..||   
Yeast    70 YTFSTPKFEPIVTQQEGRNLIQACLNAPD-------DE-------EEDE------EEDGDDD--- 111

  Fly   284 TSSGNESDDSSDVE 297
               .::.||.:|::
Yeast   112 ---DDDDDDGNDMQ 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_726438.1 MADS_SRF_like 166..247 CDD:238166 51/80 (64%)
MCM1NP_013757.1 ARG80 18..286 CDD:227400 64/131 (49%)

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