DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and AGL104

DIOPT Version :9

Sequence 1:NP_001286837.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_173632.1 Gene:AGL104 / 838818 AraportID:AT1G22130 Length:335 Species:Arabidopsis thaliana


Alignment Length:158 Identity:40/158 - (25%)
Similarity:75/158 - (47%) Gaps:19/158 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATR-KLQPM 229
            ||||::::.|:|...|..|||||:.|::|||||||.|....:.|::.|.:..:..|:.: :::.:
plant     2 GRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSDRLSLFSGKTRIEDV 66

  Fly   230 ITS--EAGKQLIQTCLNSPDP---PSVGGGDQRMSATGFEETELSYNIADEDSKDDRSPTSSGNE 289
            .:.  ...||..::.|..||.   |.:            :..|....|..:...::.......|.
plant    67 FSRFINLPKQERESALYFPDQNRRPDI------------QNKECLLRILQQLKTENDIALQVTNP 119

  Fly   290 SDDSSDV-EMPAEAAEVATKLPASKTEV 316
            :..:||| |:..|...:..:|..::.|:
plant   120 AAINSDVEELEHEVCRLQQQLQMAEEEL 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_001286837.1 MADS_SRF_like 166..247 CDD:238166 27/83 (33%)
AGL104NP_173632.1 MADS_MEF2_like 2..75 CDD:238165 24/72 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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