DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and AT1G17310

DIOPT Version :9

Sequence 1:NP_001286837.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001322190.1 Gene:AT1G17310 / 838303 AraportID:AT1G17310 Length:228 Species:Arabidopsis thaliana


Alignment Length:141 Identity:43/141 - (30%)
Similarity:67/141 - (47%) Gaps:32/141 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 DSVDNYNPL---PNKKSPPANGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTG 204
            |||.:.|.|   |.|::.....|.|:||.||:::.|:.:.:|..|||||:.|:.||:.|||.|||
plant    33 DSVQSPNMLVRQPKKETTTQTPKTTRGRQKIEIKKIEEETKRQVTFSKRRRGLFKKSAELSVLTG 97

  Fly   205 TQVMLLVASETGHVYTFATRKLQPMITSEAGKQLIQTCLNSPDPPSVGG--GDQRMSATGFEETE 267
            .::.::..|:...:|.|.  .:..:|.....|          .|..:.|  ||            
plant    98 AKIAVITFSKCDRIYRFG--HVDALIDKYLRK----------SPVKLEGYSGD------------ 138

  Fly   268 LSYNIADEDSK 278
               |.|||:|:
plant   139 ---NAADEESR 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_001286837.1 MADS_SRF_like 166..247 CDD:238166 25/80 (31%)
AT1G17310NP_001322190.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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