DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and AGL80

DIOPT Version :9

Sequence 1:NP_001286837.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_199678.1 Gene:AGL80 / 834925 AraportID:AT5G48670 Length:321 Species:Arabidopsis thaliana


Alignment Length:344 Identity:71/344 - (20%)
Similarity:110/344 - (31%) Gaps:132/344 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 RVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI- 230
            |.|:|:.||.|...|..||.|||.|:|||.:|||||.|.....::         ::.....|.: 
plant     3 RKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAII---------YSPYDTNPEVW 58

  Fly   231 TSEAGKQLIQTCLNSPDPPSVGGGDQRMSATGFEETELSYNIADEDSKDDRSPTSSGNESDDSSD 295
            .|.:|.|.:.:...:  .|.:....:.:...||    |...||       ::..:...:..||.:
plant    59 PSNSGVQRVVSEFRT--LPEMDQHKKMVDQEGF----LKQRIA-------KATETLRRQRKDSRE 110

  Fly   296 VEMPAEAAEVATK------------------------------------LPASKTEVSAPPAASC 324
            :||    .||..:                                    |..|.||:.   .:|.
plant   111 LEM----TEVMFQCLIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEIG---ESSS 168

  Fly   325 SAATASSGHKTMPALNYQTDTNSGPSTSTAAGGGGSADSKYVYSAASIANI-------------- 375
            .|..||.|:..||.|...|    .|:|:....|..|       |.|::||.              
plant   169 VAVAASEGNIPMPNLVATT----APTTTIYEVGSSS-------SFAAVANFVNPIDLQQFRHPAA 222

  Fly   376 ---------------------------------PQKMLRQLIQSG--------HLQVHAEEDGNQ 399
                                             |::|..|..|.|        |..:|.:...:|
plant   223 QHVGLNEQPQNLNLNLNQNYNQNQEWFMEMMNHPEQMRYQTEQMGYQFMDDNHHNHIHHQPQEHQ 287

  Fly   400 YVTIPLSSTAANLIKSNKL 418
            :.....||.|.:...|:.:
plant   288 HQIHDESSNALDAANSSSI 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_001286837.1 MADS_SRF_like 166..247 CDD:238166 26/80 (33%)
AGL80NP_199678.1 MADS_SRF_like 2..85 CDD:238166 27/92 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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