DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and AGL75

DIOPT Version :9

Sequence 1:NP_001286837.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_198936.1 Gene:AGL75 / 834122 AraportID:AT5G41200 Length:330 Species:Arabidopsis thaliana


Alignment Length:220 Identity:46/220 - (20%)
Similarity:77/220 - (35%) Gaps:30/220 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 YTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRK-------LQPMITSEAGKQL- 238
            :|:.|.|...|.|||.||.||...:..::.....|.:.|:...|       |:..:.:||.::. 
plant    18 FTSLSNRLETIFKKASELCTLCDIEACVIYYGPDGELKTWPKEKEKVRDIALRYSLLNEALRRKK 82

  Fly   239 ---IQTCLNSPDPPSVGGGDQRMSATGFEETELSYNIADEDSKDDRSPTSSGNESDDSSDVEMPA 300
               :...||......:...:::|..:......|.|.:||....|..||.....|...|       
plant    83 SVNLHGFLNKKKNKGLKNPNKKMKTSLKNVNILKYPLADHYPPDQVSPLIQSLELHVS------- 140

  Fly   301 EAAEVATKLPASKTEVSAPPAASCSAATASSGHKTMPALNYQTDTNSGPSTSTAAGGGGSADSKY 365
            :..|....|.:.|...:.|...|.          |..:||:.|.:.:....|......|  |:..
plant   141 KFQERLRFLESQKQNQTKPDHQSL----------TPSSLNHYTQSLNPSQFSLFMYNHG--DNTL 193

  Fly   366 VYSAASIANIPQKMLRQLIQSGHLQ 390
            .....|.:|..|.....|::...|:
plant   194 SQIPVSASNFNQDYFSALLEESELK 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_001286837.1 MADS_SRF_like 166..247 CDD:238166 19/75 (25%)
AGL75NP_198936.1 MADS_SRF_like <19..85 CDD:238166 17/65 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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