DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and AGL76

DIOPT Version :9

Sequence 1:NP_001286837.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_198828.1 Gene:AGL76 / 834009 AraportID:AT5G40120 Length:385 Species:Arabidopsis thaliana


Alignment Length:232 Identity:47/232 - (20%)
Similarity:74/232 - (31%) Gaps:39/232 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 TTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRK------------LQPMITSEAG 235
            |:.|.|...|.|||.||.||...:..::.....|.:.|:...|            |...:.|:..
plant    18 TSLSNRLETIFKKASELCTLCDIEACVIYYGPDGELKTWPKEKEKVRDIALRYSQLNEALRSKKS 82

  Fly   236 KQLIQTCLNSPDPPSVGG----GDQRMSATGFEETELSYNIADEDSKDDRSPTSSGNESDDSSDV 296
            ..| ...||........|    .::|.:........|.|.:||....|..|..:.          
plant    83 VNL-HGFLNKKKKKKKKGLKNPNNKRKTCLKKNVNVLKYPLADHYPPDQVSQLTQ---------- 136

  Fly   297 EMPAEAAEVATKLPASKTEVSAPPAASCSAATASSGHKTMPALNYQTDTNSGPSTSTAAGGGGSA 361
                     :.||..||.:.......|...........|..:||:||.:.:....|......|  
plant   137 ---------SLKLHVSKFQERLRFLESQKQTKPDHQSLTPSSLNHQTQSLNPRQFSLFMYNHG-- 190

  Fly   362 DSKYVYSAASIANIPQKMLRQLIQSGHLQVH-AEEDG 397
            |:.....:.|.:|..|.....|::...|:.. .::||
plant   191 DNTLSQISVSASNFNQNYFSALLEQSELKNQLMKQDG 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_001286837.1 MADS_SRF_like 166..247 CDD:238166 19/75 (25%)
AGL76NP_198828.1 MADS_SRF_like <23..84 CDD:238166 14/60 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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