DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and AGL98

DIOPT Version :9

Sequence 1:NP_001286837.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_198797.1 Gene:AGL98 / 833977 AraportID:AT5G39810 Length:329 Species:Arabidopsis thaliana


Alignment Length:255 Identity:52/255 - (20%)
Similarity:89/255 - (34%) Gaps:65/255 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 TTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKQLIQTCLNSPD 247
            |:.|.|...|.:||.||.||...:..::.....|.:.|:                          
plant    26 TSLSNRLETIFRKASELCTLCDIEACVIYYGPDGELKTW-------------------------- 64

  Fly   248 PPSVGGGDQRMSATGFEETELSYNIADEDSKDDRSPTSSG--NESDDSSDVEMPAEAAEVATKLP 310
            ||      :|...   |:..|.|:..:|..:..:|.|...  |:..:.:::|..|:..:...|..
plant    65 PP------EREKV---EDIALRYSQLNEALRRKKSVTLYDFLNKKKNKTNLEKKAKIKDNDLKRL 120

  Fly   311 ASKTEVSAPPAASCSAATASSGHK-TMP--------ALNYQTDTNSGPSTSTAAGGGGSADSKYV 366
            :.:..||  ..........|..|| |.|        :||.||.:.:....|......|  |:...
plant   121 SLEPHVS--KVRERIRFVESQKHKETKPDHQSLASSSLNNQTQSLNPSQFSLFMYNHG--DNILS 181

  Fly   367 YSAASIANIPQKMLRQLIQSGHL--QVHAEE------------DGNQYVT-IPLSSTAAN 411
            ....|.:|..|.....|::...|  |:..:|            :|:..:: ||||::..|
plant   182 QIPVSASNFNQDYFSALLEQSELKSQIMKQEVCGYEQNMCMSNNGDATLSQIPLSASNFN 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_001286837.1 MADS_SRF_like 166..247 CDD:238166 12/63 (19%)
AGL98NP_198797.1 MADS_SRF_like <31..91 CDD:238166 17/94 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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