DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and AGL77

DIOPT Version :9

Sequence 1:NP_001286837.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_198690.1 Gene:AGL77 / 833865 AraportID:AT5G38740 Length:426 Species:Arabidopsis thaliana


Alignment Length:278 Identity:50/278 - (17%)
Similarity:94/278 - (33%) Gaps:58/278 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 TTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKQLIQTCLNSPD 247
            |:.|.|...|.|||.||.||...:..::.....|.:.|:...:.:....:....||.:...:...
plant    27 TSLSNRLETIFKKASELCTLCDIEACVIYYGPDGELKTWPKEREKVRDIALRFNQLNEALRHKKS 91

  Fly   248 PPSVGGGDQRMSATGFEETE------------LSYNIADEDSKDDRSPTSSGNESDDSSDVEMPA 300
            ....|..:::....|.:...            |.|.:||..|.|..|..:...|.:.|       
plant    92 VNLHGFLNKKKKNKGLKNPNKKKKTSLKNVNVLKYPLADHYSPDQVSQLTQSLELNVS------- 149

  Fly   301 EAAEVATKLPASKTEVSAPPAASCSAATASSGHKTMPALNYQTDTNSGPSTSTAAGGGGSADSKY 365
            :..|....|.:.|...:.|            .|:::.::: ..:.:..||..          |.:
plant   150 KFQERLRFLESQKQNETKP------------DHQSLTSIS-SLNQSLNPSQF----------SLF 191

  Fly   366 VYS---------AASIANIPQKMLRQLIQSGHLQVHAEEDGNQYVTIPLSSTAANLIKSNKLTAS 421
            :|:         ..|.:|..|..:..|::...|:       :|.:...:.....|:..||...|:
plant   192 MYNHGYNTLSQIPVSASNFNQDYISALLEQSELK-------SQIMKQEVCGYEQNMCMSNHGDAT 249

  Fly   422 GSGASGSGTPVKNDASAD 439
            .|....|.:....|.||:
plant   250 LSQIPFSASNFNQDFSAN 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_001286837.1 MADS_SRF_like 166..247 CDD:238166 15/63 (24%)
AGL77NP_198690.1 MADS_SRF_like <32..93 CDD:238166 13/60 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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