DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and AGL105

DIOPT Version :9

Sequence 1:NP_001286837.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_680360.2 Gene:AGL105 / 833717 AraportID:AT5G37415 Length:316 Species:Arabidopsis thaliana


Alignment Length:186 Identity:38/186 - (20%)
Similarity:68/186 - (36%) Gaps:46/186 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 GLTLQGLDNVASG----------AVDDSVDNYNPLPNKKSPPANGKKTKGRVKIKMEYIDNKLRR 181
            |..|:.:|::...          .::..|..|.|....|:.|...:|.:. :.::...::..|||
plant    69 GFVLEKMDHLQESFRGSELCILCDIEACVIYYGPDGELKTWPKEREKVED-IALRYSQLNEALRR 132

  Fly   182 ------YTTFSKR--KTGIMKKAY-----ELSTLT---------------GTQVMLLVASETGHV 218
                  |...:|:  ||.:.|||.     :|.|..               ..|:..|:.|...||
plant   133 KKSVTLYDFLNKKKDKTNLEKKAMITDNDDLKTCLKNVNVLKSPIADHYFNDQISQLIQSLEPHV 197

  Fly   219 YTFATRKLQPMITSEAGKQLIQTCLNSPDPPSVGGGDQRMSATGFEETELSYNIAD 274
                 .|:|..|.....::..:|.|:.....|:...:|.::.:.|  |...||..|
plant   198 -----SKVQERIRFVESQKHKETKLDHQSLASIYSLNQSLNPSQF--TLFLYNHGD 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_001286837.1 MADS_SRF_like 166..247 CDD:238166 22/108 (20%)
AGL105NP_680360.2 MADS <85..136 CDD:294078 9/51 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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