DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and AGL39

DIOPT Version :9

Sequence 1:NP_001286837.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_198065.2 Gene:AGL39 / 832771 AraportID:AT5G27130 Length:306 Species:Arabidopsis thaliana


Alignment Length:284 Identity:69/284 - (24%)
Similarity:112/284 - (39%) Gaps:65/284 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 KKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGH---VYTFA- 222
            |.||.:::||..  :.|.:|..|.|||:..:..||.:|..::|..:.:.|.|.:..   ||:|: 
plant    11 KGTKRKIEIKKR--ETKEQRAVTCSKRRQTVFSKAADLCLISGANIAVFVTSPSDSSDVVYSFSG 73

  Fly   223 ------------TRKLQPMITSEAGKQ---------LIQTCLNSPDPPSVGGGDQRMS---ATGF 263
                        .||..|.|.:.||.:         |..:|.:..:...:....|||.   ....
plant    74 YSSAYEIADCYLNRKPPPKIVNPAGSKLGFWWEDPDLYHSCDDLSELSIIEDRLQRMKKHVMACL 138

  Fly   264 EETELSYNIADEDSKDDRSPTSSGNESDDSSDVEMPAEAAEVATKLPASKTEVSAPPAASCSAAT 328
            |:.|.|..:    |..|::|.|:.  |.|..|.:..:.:...:|..|.|..|.       ||..|
plant   139 EKEEKSQLV----SSFDQNPNSTC--SLDVEDCDGSSYSQIASTFTPNSVNEY-------CSDQT 190

  Fly   329 ASSGHKTMPALNYQTDTNSGPSTSTAAGGGGSADSKYVY---SAASIANIPQKMLRQLIQSGHLQ 390
            .||.|         .|.|  |:.|:.:.......|.|..   |::.:|:..|.      .|..:|
plant   191 FSSFH---------GDQN--PNLSSPSFDQDCYSSLYQICGESSSQVASFDQN------PSSEIQ 238

  Fly   391 -VHAEEDGNQY-VTIPLSSTAANL 412
             ...||:.||. :.:..:.|.||:
plant   239 GFETEEEINQINLLLQETQTEANV 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_001286837.1 MADS_SRF_like 166..247 CDD:238166 25/105 (24%)
AGL39NP_198065.2 MADS_SRF_like 13..97 CDD:238166 23/85 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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