DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and AGL54

DIOPT Version :9

Sequence 1:NP_001286837.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_198061.2 Gene:AGL54 / 832767 AraportID:AT5G27090 Length:187 Species:Arabidopsis thaliana


Alignment Length:65 Identity:20/65 - (30%)
Similarity:26/65 - (40%) Gaps:20/65 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 KKS--PPANGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETG 216
            |||  ..:|.|||                  |..|.|:..:.|||.|||||...:|.::.....|
plant    22 KKSSLSSSNAKKT------------------TNLSMREQTMFKKALELSTLCDIEVCVIYYGRDG 68

  Fly   217  216
            plant    69  68

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_001286837.1 MADS_SRF_like 166..247 CDD:238166 13/51 (25%)
AGL54NP_198061.2 MADS_SRF_like 20..102 CDD:238166 20/65 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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