DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and AGL13

DIOPT Version :9

Sequence 1:NP_001286837.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_191671.1 Gene:AGL13 / 825284 AraportID:AT3G61120 Length:244 Species:Arabidopsis thaliana


Alignment Length:267 Identity:61/267 - (22%)
Similarity:102/267 - (38%) Gaps:91/267 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFA-------- 222
            ||.|::::.|:||:.|..||||||:|::|||||||.|...:|.|::.|..|.:|.|:        
plant     2 GRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTI 66

  Fly   223 ------------------TRKLQPMITSEAGK--QLIQTCLNSPDPPSVGGG-----------DQ 256
                              |:.|:..:|....|  .|::|..|.......|..           :.
plant    67 ERYYRCKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEG 131

  Fly   257 RMSATGFEETELSYNIADEDSKDDRSPTSSGNESDDSSDVEMPAEAAEVATKLPASKTE------ 315
            .:|||..::|::.....:|..:.:|                   |..::..||.. :||      
plant   132 ALSATRKQKTQVMMEQMEELRRKER-------------------ELGDINNKLKL-ETEDHDFKG 176

  Fly   316 -----VSAPPAASCSA-ATASSGHKTMPALNYQTDTNSG---------------PSTSTAAGGGG 359
                 ::....|.||. .:..|.|:     ||.:|.|.|               .|:.|.:....
plant   177 FQDLLLNPVLTAGCSTDFSLQSTHQ-----NYISDCNLGYFLQIGFQQHYEQGEGSSVTKSNARS 236

  Fly   360 SADSKYV 366
            .|::.:|
plant   237 DAETNFV 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_001286837.1 MADS_SRF_like 166..247 CDD:238166 35/108 (32%)
AGL13NP_191671.1 MADS_MEF2_like 2..78 CDD:238165 28/75 (37%)
K-box 86..166 CDD:396188 15/98 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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