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Protein Alignment bs and SHP1
DIOPT Version :9
Sequence 1: | NP_001286837.1 |
Gene: | bs / 37890 |
FlyBaseID: | FBgn0004101 |
Length: | 449 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001325709.1 |
Gene: | SHP1 / 825047 |
AraportID: | AT3G58780 |
Length: | 281 |
Species: | Arabidopsis thaliana |
Alignment Length: | 96 |
Identity: | 35/96 - (36%) |
Similarity: | 55/96 - (57%) |
Gaps: | 5/96 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 156 SPPANGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYT 220
|..|...|..||.||:::.|:|...|..||.||:.|::|||||||.|...:|.|::.|..|.:|.
plant 7 SHDAESSKKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYE 71
Fly 221 FATRKLQPMITSEAGKQLIQTCLNSPDPPSV 251
:|...::..| ::..:.|.::.:||||
plant 72 YANNSVRGTI-----ERYKKACSDAVNPPSV 97
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
bs | NP_001286837.1 |
MADS_SRF_like |
166..247 |
CDD:238166 |
28/80 (35%) |
SHP1 | NP_001325709.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5068 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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