DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and AGL79

DIOPT Version :9

Sequence 1:NP_001286837.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_189645.2 Gene:AGL79 / 822726 AraportID:AT3G30260 Length:249 Species:Arabidopsis thaliana


Alignment Length:191 Identity:49/191 - (25%)
Similarity:81/191 - (42%) Gaps:27/191 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI 230
            ||.::::..|:||:||..|||||:||::|||.|:|.|...:|.|:|.|..|.::.::        
plant     2 GRGRVQLRRIENKIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYS-------- 58

  Fly   231 TSEAGKQLIQTCLNSPDPPSVGGGD---QRMSATGFEETELS-----YNIADEDSKDDRSPTSSG 287
               ||..: :..|:..:..:..|.|   ..:.:.|...||.|     .::.....:..|.....|
plant    59 ---AGSSM-ERILDRYERSAYAGQDIPTPNLDSQGECSTECSKLLRMIDVLQRSLRHLRGEEVDG 119

  Fly   288 NESDDSSDVEMPAEAAEVATKLPASKTEVSAPPAASCSAATASSGHKTMPALNYQTDTNSG 348
            ....|...|||..:.|...|:...::..|.       |.|......|.:..|..|....:|
plant   120 LSIRDLQGVEMQLDTALKKTRSRKNQLMVE-------SIAQLQKKEKELKELKKQLTKKAG 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_001286837.1 MADS_SRF_like 166..247 CDD:238166 28/80 (35%)
AGL79NP_189645.2 MADS_MEF2_like 2..79 CDD:238165 29/88 (33%)
K-box 94..>151 CDD:279785 11/63 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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