DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and AT3G05860

DIOPT Version :9

Sequence 1:NP_001286837.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_187237.2 Gene:AT3G05860 / 819755 AraportID:AT3G05860 Length:260 Species:Arabidopsis thaliana


Alignment Length:276 Identity:60/276 - (21%)
Similarity:106/276 - (38%) Gaps:56/276 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 RVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLV-------------ASETGHV 218
            |.|:.:.||.|:..|..||:|||.|::||.:|||.|.|.:...::             .||..:|
plant     3 RKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPSNSEVKNV 67

  Fly   219 ---YTFATRKLQ--PMITSEAG-KQLIQTCLNSPDPPSVGGGDQRMSATGFE----ETELSYNIA 273
               :...|:..|  .|::.|.. :|.|...:.|.:...:...::.|....|:    :.| ..|:.
plant    68 MENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQLLSGKGE-KLNLT 131

  Fly   274 DEDSKD-----D---RSPTSSGNESDDSSDVEMPAEAAEVATKLPASKTEVSAPPAASCSAATAS 330
            |.:.:|     |   :......|::.:.|.:| |.|::.....:  :.|.|..|..:|......:
plant   132 DRNREDLCKYIDQYLKELYHHKNKTINQSHIE-PGESSGATNAM--TPTSVVEPIISSIQRPNQN 193

  Fly   331 SGHKTMPALNYQTDTNSGPSTSTAAGGGGSADSKYVYSAASIANIPQKMLRQLIQSGHLQVHAEE 395
            .....:....||.....|.......|         :|:.:.|.|..::.|     ..|:..|::|
plant   194 PNFNHLSHNQYQYQQQFGYPILVQDG---------IYNPSQIQNQHEEWL-----DDHMMNHSKE 244

  Fly   396 -------DGNQYVTIP 404
                   |.|.|...|
plant   245 ISHPLMDDNNFYYQQP 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_001286837.1 MADS_SRF_like 166..247 CDD:238166 29/98 (30%)
AT3G05860NP_187237.2 MADS_SRF_like 2..85 CDD:238166 25/81 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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