DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and MEF2C

DIOPT Version :9

Sequence 1:NP_001286837.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001180276.1 Gene:MEF2C / 4208 HGNCID:6996 Length:483 Species:Homo sapiens


Alignment Length:328 Identity:77/328 - (23%)
Similarity:128/328 - (39%) Gaps:67/328 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI 230
            ||.||::..|.::..|..||:|||.|:||||||||.|...::.|::.:.|..::.:|:..:..::
Human     2 GRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVL 66

  Fly   231 ----------TSEAGKQLIQT--------CLNSPDPPSVGGGDQRMSATGFEETELSYNIADEDS 277
                      .|.....:::|        | :||||.:......:....|.|.       .|.||
Human    67 LKYTEYNEPHESRTNSDIVETLRKKGLNGC-DSPDPDADDSALNKKENKGCES-------PDPDS 123

  Fly   278 KDDRSPTSSG-----NESDDS--SDVEMPAEAA---EVATKLPASKTEVSAPPAASCSAATASSG 332
            ....:|.:..     ||..|:  ...::||...   |:...:|     ||:..:...|...:|.|
Human   124 SYALTPRTEEKYKKINEEFDNMIKSHKIPAVPPPNFEMPVSIP-----VSSHNSLVYSNPVSSLG 183

  Fly   333 HKTM-----PALNYQT----DTNSGPSTSTAAG-GGGSADSKYVYSAASIANIPQKMLRQLIQSG 387
            :..:     |:|...:    .|:..||.....| .||...|....||.:....|:.....|:..|
Human   184 NPNLLPLAHPSLQRNSMSPGVTHRPPSAGNTGGLMGGDLTSGAGTSAGNGYGNPRNSPGLLVSPG 248

  Fly   388 HLQVHAEEDG-------------NQYVTIPLSSTAANLIKS-NKLTASGSGASGSGTPVKNDASA 438
            :|..:.:...             :..|.||..|  .|.:.| |:...:...|....|||.:.|:.
Human   249 NLNKNMQAKSPPPMNLGMNNRKPDLRVLIPPGS--KNTMPSVNQRINNSQSAQSLATPVVSVATP 311

  Fly   439 DKP 441
            ..|
Human   312 TLP 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_001286837.1 MADS_SRF_like 166..247 CDD:238166 28/98 (29%)
MEF2CNP_001180276.1 ARG80 1..263 CDD:227400 64/273 (23%)
MADS_MEF2_like 2..78 CDD:238165 24/75 (32%)
HJURP_C 117..170 CDD:403531 14/64 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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