DRSC/TRiP Functional Genomics Resources

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Protein Alignment bs and srfb

DIOPT Version :10

Sequence 1:NP_726438.1 Gene:bs / 37890 FlyBaseID:FBgn0004101 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001429141.1 Gene:srfb / 393604 ZFINID:ZDB-GENE-040426-1294 Length:543 Species:Danio rerio


Alignment Length:461 Identity:174/461 - (37%)
Similarity:220/461 - (47%) Gaps:103/461 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GLSLADPADMYG---------NPALGAGRPP--SGGLLQNMG-GVPPMQRPNPAAGAPPAPQCQT 72
            ||..:.||.|.|         .|....|:.|  :||:|..:| |:|....|:.            
Zfish    29 GLVRSVPAGMLGGSGAARGGFRPGSSGGQGPLQAGGMLSGLGIGMPVRFDPDK------------ 81

  Fly    73 LHSPQHASQQQQQQQQQQQQHQQQQQQQQQHP----QQQRGLKRSGSDCYEDHHRSSGGLTLQGL 133
             .||.|.........      ....:::|..|    ::..|:||..::..........||...|.
Zfish    82 -ESPLHGCSGSDADS------DSGDEEEQSGPLGDTRRSGGVKRERAEMEAALGAQEAGLPAAGF 139

  Fly   134 DNVASGAVDDSVDNYNPLPNKKSPPANGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYE 198
            ..:|.|     |....|          ||||:||||||||:||||||||||||||||||||||||
Zfish   140 GVLAGG-----VAGAKP----------GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYE 189

  Fly   199 LSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKQLIQTCLNSPD-PPSVGGGDQRMSATG 262
            |||||||||:|||||||||||||||||||||||||.||.|||||||||| ||.....||||||:|
Zfish   190 LSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDCSDQRMSASG 254

  Fly   263 FEETELSYNIADEDS----KDDRSPTSSGNESDDSSDVEMPAEAAEVATKLPASKTEVSAPPAAS 323
            :|||||:|.:::.:|    ||...|..:                   .:.||.|   .||||.  
Zfish   255 YEETELTYQVSESESLGEGKDSLKPVFT-------------------VSSLPGS---TSAPPV-- 295

  Fly   324 CSAATASSGHKTMPALNYQTDTNSGPSTSTAAGGGGSADSKYVYSAAS--IANIPQKMLRQLIQS 386
              ..|:||| .:.|..:| :.||.....|||...|....|.:.:...|  ....|...|.|    
Zfish   296 --TPTSSSG-TSYPISSY-SSTNGSILKSTAPPAGVMLPSAFTFMPGSPFAPGAPALPLAQ---- 352

  Fly   387 GHLQVH--AEEDGNQYVTIPLSSTAANLIKSN--KLTASGSGASGSGTP-------VKNDASADK 440
              ||.|  |.::..|.::...|.|.|...:..  :|.||.: .:|...|       |::.:|:|.
Zfish   353 --LQPHTLALQNSAQPISASCSPTPAQQQQQTVFRLPASVT-LTGGAMPQQLQTLQVQSSSSSDG 414

  Fly   441 PLTIKQ 446
            ...|.|
Zfish   415 SSEISQ 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsNP_726438.1 MADS_SRF_like 166..247 CDD:238166 76/80 (95%)
srfbNP_001429141.1 None

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