DRSC/TRiP Functional Genomics Resources

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Protein Alignment slbo and hlfb

DIOPT Version :10

Sequence 1:NP_523843.1 Gene:slbo / 37889 FlyBaseID:FBgn0005638 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_005156391.1 Gene:hlfb / 557886 ZFINID:ZDB-GENE-110420-3 Length:300 Species:Danio rerio


Alignment Length:260 Identity:52/260 - (20%)
Similarity:79/260 - (30%) Gaps:108/260 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 GYG---SGANGLTGGGNPLNGGNTTPSSNGSNGSTGSSNGSQF--TNLTTANVLAHHNLPHLAAA 323
            |||   .....|...|||.......|:   ....|.|.:|..|  ..:.....|:.:.:|. :.|
Zfish    37 GYGKERDKVKKLDEEGNPPQSAFLGPT---LWDKTLSYDGDSFQLEYMDLEEFLSENGIPS-SPA 97

  Fly   324 AGAHNLLKQHSKLHAQQQHQQHQQQQQH------------------------------------- 351
            ....||.:.|   |.|||.||||||||.                                     
Zfish    98 QHDQNLHQHH---HQQQQQQQHQQQQQQVSMPQGPISVMDLSSRSIHTAISPQNCLHSPGRSVLP 159

  Fly   352 ------------------------------------------RKHSNKHVD-------------- 360
                                                      ||.|.:.:.              
Zfish   160 PSRNTPSPVDPEALHIPVSYEPDPADLALSSVPGQEVFDPRKRKFSEEELKPQPMIKKARKIFIP 224

  Fly   361 ---KGTDEYRRRRERNNIAVRKSREKAKVRSREVEERVKSLLKEKDALIRQLGEMTNELQLHKQI 422
               |..::|..||.:||:|.::||:..:::..::..|...|.||..||.:::.::..||...|.|
Zfish   225 DDLKQDEKYWARRRKNNVAAKRSRDARRLKENQIAIRAGFLEKENMALRQEVADLRKELGRCKNI 289

  Fly   423  422
            Zfish   290  289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slboNP_523843.1 bZIP_CEBP 362..420 CDD:269841 16/57 (28%)
coiled coil 363..420 CDD:269841 16/56 (29%)
hlfbXP_005156391.1 bZIP_HLF 230..288 CDD:269843 16/57 (28%)
coiled coil 230..288 CDD:269843 16/57 (28%)

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