DRSC/TRiP Functional Genomics Resources

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Protein Alignment slbo and cebpa

DIOPT Version :10

Sequence 1:NP_523843.1 Gene:slbo / 37889 FlyBaseID:FBgn0005638 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001011044.1 Gene:cebpa / 496454 XenbaseID:XB-GENE-853397 Length:297 Species:Xenopus tropicalis


Alignment Length:288 Identity:81/288 - (28%)
Similarity:113/288 - (39%) Gaps:72/288 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 GALAYMPQPVHATYNNSSDENSSVGSDSSTIKEEPIDPEYRRHLQEAASQQAAFMGNGAGLYNGY 265
            ||..|...|....:....:..:|: ..|:.|.....:.|:...|..:..|:.|     .|.:. |
 Frog    24 GAYGYREPPTALEHTELCENENSI-DISAYIDPAAFNDEFLADLFHSNKQEKA-----KGDFE-Y 81

  Fly   266 GSGANGLTGGGNPLNGG---NTTPS--SNG-------------SNGSTGSSNGSQFTNLTTANVL 312
            ..||.|....|:||..|   |...|  .||             ..||..||         .|.:.
 Frog    82 HQGAVGAAVAGHPLMYGCMANYMDSKLDNGLRPLVIKQEPREEEEGSRASS---------LAALY 137

  Fly   313 AHHNLPHLA--------AAAGAHNLLKQH---------SKLHAQQQHQQHQQ------------- 347
            .||...|.:        .|..:.:|...|         |..|....|..|.|             
 Frog   138 PHHAPQHSSHLQYQVAHCAQTSMHLQPGHPTPPPTPVPSPHHHPTHHHHHLQSSSLKSVSPSSSI 202

  Fly   348 ---QQQHRKHSNKHVDKGTDEYRRRRERNNIAVRKSREKAKVRSREVEERVKSLLKEKDALIRQL 409
               ..::|..|.|.|||.:.|||.|||||||||||||:|||:|:.|.:.:|..|..|.|.|.:::
 Frog   203 SSSSSENRGKSKKWVDKSSSEYRVRRERNNIAVRKSRDKAKMRNAETQHKVIELSTENDKLRKRV 267

  Fly   410 GEMTNELQLHKQIYMQLMNHANPEVSRV 437
            .:::.||:..:.|:.||     ||.|.|
 Frog   268 EQLSRELETLRGIFRQL-----PESSLV 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slboNP_523843.1 bZIP_CEBP 362..420 CDD:269841 28/57 (49%)
coiled coil 363..420 CDD:269841 28/56 (50%)
cebpaNP_001011044.1 bZIP_CEBPB 214..284 CDD:269860 33/69 (48%)
coiled coil 221..282 CDD:269860 29/60 (48%)

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