DRSC/TRiP Functional Genomics Resources

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Protein Alignment slbo and nfil3-6

DIOPT Version :9

Sequence 1:NP_001286836.1 Gene:slbo / 37889 FlyBaseID:FBgn0005638 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001002218.1 Gene:nfil3-6 / 431765 ZFINID:ZDB-GENE-040704-63 Length:350 Species:Danio rerio


Alignment Length:104 Identity:29/104 - (27%)
Similarity:50/104 - (48%) Gaps:14/104 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 LTTANVLAHHNLPHLAAAAGAHNLLKQHSKLHAQQQHQQHQQQQQHRKHSNKHVDKGTDEYRRRR 370
            ||::::|             |.:||.:.|.|..:..........:.::....| :|..|.|..:|
Zfish    11 LTSSSLL-------------ARSLLGRTSALKRKDVSPSSISSARRKREFIPH-EKKDDGYWDKR 61

  Fly   371 ERNNIAVRKSREKAKVRSREVEERVKSLLKEKDALIRQL 409
            ::||.|.::||||.:|....:|.||.:||:|...|..:|
Zfish    62 KKNNEAAKRSREKRRVNDMVLENRVLTLLEENARLRAEL 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slboNP_001286836.1 bZIP_CEBP 362..420 CDD:269841 19/48 (40%)
coiled coil 363..420 CDD:269841 19/47 (40%)
nfil3-6NP_001002218.1 bZIP_NFIL3 53..112 CDD:269842 19/48 (40%)
coiled coil 54..112 CDD:269842 19/47 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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