DRSC/TRiP Functional Genomics Resources

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Protein Alignment slbo and Cebpg

DIOPT Version :9

Sequence 1:NP_001286836.1 Gene:slbo / 37889 FlyBaseID:FBgn0005638 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_036963.1 Gene:Cebpg / 25301 RGDID:2330 Length:150 Species:Rattus norvegicus


Alignment Length:125 Identity:40/125 - (32%)
Similarity:70/125 - (56%) Gaps:19/125 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 AAAAGAHNLLKQHSKLHAQQQHQQHQ--------------QQQQHRKHSNKHVDKGTDEYRRRRE 371
            |:.||.:.:...|::.||....|..|              ..:|.:|.|  .:|:.:||||:|||
  Rat     8 ASTAGVNGISVIHTQAHASGLQQVPQLVPAGPGGGGKAVPPSKQSKKSS--PMDRNSDEYRQRRE 70

  Fly   372 RNNIAVRKSREKAKVRSREVEERVKSLLKEKDALIRQLGEMTNELQLHKQIYMQLMNHAN 431
            |||:||:|||.|:|.::::..:||..|.:|.:.|..::..:|.||.:.|.::::   ||:
  Rat    71 RNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKDLFLE---HAH 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slboNP_001286836.1 bZIP_CEBP 362..420 CDD:269841 25/57 (44%)
coiled coil 363..420 CDD:269841 25/56 (45%)
CebpgNP_036963.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..94 23/68 (34%)
bZIP_CEBPG 60..120 CDD:269861 25/59 (42%)
coiled coil 65..116 CDD:269861 22/50 (44%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 66..93 14/26 (54%)
Leucine-zipper. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 97..118 6/20 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 57 1.000 Domainoid score I10594
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002856
OrthoInspector 1 1.000 - - otm45708
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.770

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