DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slbo and Tef

DIOPT Version :10

Sequence 1:NP_523843.1 Gene:slbo / 37889 FlyBaseID:FBgn0005638 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_011243859.1 Gene:Tef / 21685 MGIID:98663 Length:340 Species:Mus musculus


Alignment Length:64 Identity:21/64 - (32%)
Similarity:37/64 - (57%) Gaps:1/64 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 DKGTDE-YRRRRERNNIAVRKSREKAKVRSREVEERVKSLLKEKDALIRQLGEMTNELQLHKQI 422
            |:..|| |..||::||:|.::||:..:::..::..|...|.||..||..::.|:..|:...|.|
Mouse   266 DEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTI 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slboNP_523843.1 bZIP_CEBP 362..420 CDD:269841 18/58 (31%)
coiled coil 363..420 CDD:269841 18/57 (32%)
TefXP_011243859.1 bZIP_HLF 269..327 CDD:269843 18/57 (32%)
coiled coil 270..327 CDD:269843 18/56 (32%)

Return to query results.
Submit another query.