DRSC/TRiP Functional Genomics Resources

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Protein Alignment slbo and cebp-1

DIOPT Version :9

Sequence 1:NP_001286836.1 Gene:slbo / 37889 FlyBaseID:FBgn0005638 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_508276.2 Gene:cebp-1 / 180481 WormBaseID:WBGene00016997 Length:319 Species:Caenorhabditis elegans


Alignment Length:98 Identity:29/98 - (29%)
Similarity:50/98 - (51%) Gaps:15/98 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 QQHQQQQQHRKHSNK-HVDKGTDEYRRRRERNNIAVRKSREKAKVRSREVEERVKSLLKEKDALI 406
            :..:.|.:.||:..| ..:|....|:.:|.|||.||||||:|||    |::::.::   |.|.:.
 Worm   212 ENFKPQTRARKYKLKADEEKAEPTYKLKRARNNDAVRKSRKKAK----ELQDKKEA---EHDKMK 269

  Fly   407 RQLGEMTNELQLHK-------QIYMQLMNHANP 432
            |::.|:...||..:       ....||:.:..|
 Worm   270 RRIAELEGLLQSERDARRRDQDTLEQLLRNKGP 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slboNP_001286836.1 bZIP_CEBP 362..420 CDD:269841 21/57 (37%)
coiled coil 363..420 CDD:269841 21/56 (38%)
cebp-1NP_508276.2 bZIP 233..280 CDD:304365 19/53 (36%)
coiled coil 236..280 CDD:269834 19/50 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166961
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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