DRSC/TRiP Functional Genomics Resources

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Protein Alignment slbo and atf-2

DIOPT Version :10

Sequence 1:NP_523843.1 Gene:slbo / 37889 FlyBaseID:FBgn0005638 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_495861.1 Gene:atf-2 / 174399 WormBaseID:WBGene00000220 Length:401 Species:Caenorhabditis elegans


Alignment Length:386 Identity:75/386 - (19%)
Similarity:136/386 - (35%) Gaps:95/386 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 NNNTSQDAALLVKQHAMHQMQQVAALGSNNNLLQKQMLQQYSTQTDLDELTTQEITLDLQHLIDD 141
            ||:.|:.:....:|:.:...:::..|.:.|..|:.|:   .:|......:|....:|.:..:..:
 Worm    64 NNDASRRSREKRRQNDLAMEEKIMLLSAENERLKSQL---GTTPIPQPSVTEPPTSLIIPQVAKN 125

  Fly   142 QFRDTETLGIFSDMVTSPGGLSATLPPSGMVS-----AAAKV--------LQQQTLRNQHGYGGR 193
            .|               |.|..|:|..|.|::     ||:.:        ||..|:::       
 Worm   126 LF---------------PAGPIASLQASSMLTVPLLQAASHIPSMLQLCQLQPTTIQS------- 168

  Fly   194 GGGGGAGGALAYMPQPVHA-TYNNSSDENSSVGSDSSTIKEEPIDPEYRRHLQEAASQQAAFMGN 257
                           ||:| |...:|...||:.|.||:....|..|        :.|.|.:|..:
 Worm   169 ---------------PVYASTQQPASTSASSLFSSSSSSAFHPFRP--------SESAQQSFPSS 210

  Fly   258 GAGLYNGYGSGANGLTGGGNP---LNGGNTTPSSNGSNGSTGSSNG-----SQFTNLTTANVLAH 314
            .. :........:..|....|   |..|::.....|....:|:...     .|..:|.:|.:...
 Worm   211 SV-IVKIERRSPDSSTDVNMPQPQLQPGSSVIQQIGQPAPSGTPQPVIQAVQQGPSLLSALLSQR 274

  Fly   315 HNLPHLAAAAGAH----NLLKQHS-------KLHAQQQHQQHQQQQQHRKHSNKHVDKGTDEYRR 368
            ...|.:..:...|    |...:|:       .:.:..........:.|..:|||     :.:|..
 Worm   275 RPSPTVPQSRTEHISGLNSPPRHTGNKSDCESVSSSASFSPSHSSEDHSNYSNK-----SPQYVD 334

  Fly   369 RRERNNIAVRKSREKAKV----RSREVEERVKSLLKEKDALIRQLGEMTNELQLHKQIYMQ 425
            ||.|||.|.::.|...:.    |||    ||:.|..|.:.|..|:..:..|:...|.:..|
 Worm   335 RRRRNNEAAKRCRANRRAVFEYRSR----RVQLLEGENEDLRTQIETLKAEIAHFKSVLAQ 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slboNP_523843.1 bZIP_CEBP 362..420 CDD:269841 18/61 (30%)
coiled coil 363..420 CDD:269841 18/60 (30%)
atf-2NP_495861.1 bZIP_NFIL3 53..>100 CDD:269842 7/35 (20%)
bZIP_HLF 328..386 CDD:269843 19/66 (29%)
coiled coil 329..386 CDD:269843 18/60 (30%)

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