DRSC/TRiP Functional Genomics Resources

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Protein Alignment slbo and cebpd

DIOPT Version :10

Sequence 1:NP_523843.1 Gene:slbo / 37889 FlyBaseID:FBgn0005638 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_571962.1 Gene:cebpd / 140817 ZFINID:ZDB-GENE-020111-4 Length:280 Species:Danio rerio


Alignment Length:237 Identity:52/237 - (21%)
Similarity:88/237 - (37%) Gaps:86/237 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 NGGNTTPSSNGSNGSTGSSNGSQFTN-------------------LTT----------------- 308
            |.|:..|..|.:|.|:.:.|..:.:|                   ::|                 
Zfish    37 NKGDAKPGENNNNNSSSTGNMMELSNAPAIYDDESAIDFSAYIESMSTVPLEICNDELFADLFNN 101

  Fly   309 -----------ANVLAHHNLPHLAAAAGAHNLL-----------KQHSK---------------- 335
                       :|..||.:........|..:..           .:||.                
Zfish   102 TVKQEKPDFYMSNTFAHKSAERHLEGFGKGSFCAPIKKEADWSDSEHSSSLPSQIEACAQTSVNF 166

  Fly   336 LHAQQQHQQHQQQQQ---HRK----HSNKHVDKGTDEYRRRRERNNIAVRKSREKAKVRSREVEE 393
            :|..|.......:.:   ||:    ...|:||:.:.|||:|||||||||||||:|||.|:.::::
Zfish   167 MHTGQPTPPTTPEPEPVAHRRPGKEKGKKNVDRHSPEYRQRRERNNIAVRKSRDKAKQRNLDMQQ 231

  Fly   394 RVKSLLKEKDALIRQLGEMTNELQLHKQIYMQLMNHANPEVS 435
            ::..|..|.:.|.:.:.::|.||...:..:.|:     ||.|
Zfish   232 KMIELGAENERLHKTIDQLTRELSSLRNFFKQM-----PEAS 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slboNP_523843.1 bZIP_CEBP 362..420 CDD:269841 26/57 (46%)
coiled coil 363..420 CDD:269841 26/56 (46%)
cebpdNP_571962.1 bZIP 198..262 CDD:473870 27/63 (43%)
coiled coil 204..255 CDD:269862 24/50 (48%)

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