DRSC/TRiP Functional Genomics Resources

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Protein Alignment slbo and cebpa

DIOPT Version :10

Sequence 1:NP_523843.1 Gene:slbo / 37889 FlyBaseID:FBgn0005638 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_571960.1 Gene:cebpa / 140815 ZFINID:ZDB-GENE-020111-2 Length:288 Species:Danio rerio


Alignment Length:365 Identity:90/365 - (24%)
Similarity:128/365 - (35%) Gaps:129/365 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 MQQVAALGSNNNLLQKQMLQQY---STQTDLDELTTQEITLDLQHLID-DQFRDTETLGIFSDMV 156
            :.:||......:|:|.|. ..|   .|..||.|:...|.::|:...|| ..|.|.....:|.:. 
Zfish     6 LYEVAPRPLMTSLVQNQQ-NPYIYKDTAGDLSEICENENSIDISAYIDPSAFNDEFLADLFHNS- 68

  Fly   157 TSPGGLSATLPPSGMVSAAAKVLQQQTLRNQHG-YGGRGGGGGAGGALAYMPQPVHATYNNSSDE 220
                                  .:|:.|:...| |....|..||.||    || ::...|...|.
Zfish    69 ----------------------SKQEKLKLASGDYDYHHGANGAPGA----PQ-MYGCLNGYMDS 106

  Fly   221 NSSVGSDSSTIKEEPIDPEYRRHLQEAASQQAAFMGNGAGLYNGYGSGANGLTGGGNPLN----G 281
            :          |.|||.....|....|..|:                          |..    |
Zfish   107 S----------KLEPIYDSQARMRPVAIKQE--------------------------PREEDELG 135

  Fly   282 GNTTPSSNGSNGSTGSSNGSQFTNLTTANVLAHHNLPHLAAAAGAHNLLKQHSKLHAQQ------ 340
            .:..|:.:.|                      .|:.|||:        ..||...|..|      
Zfish   136 DSMPPTYHHS----------------------QHHAPHLS--------YLQHQIAHCAQTTMHLQ 170

  Fly   341 -------------QHQQH------QQQQQHRKHSNKHVDKGTDEYRRRRERNNIAVRKSREKAKV 386
                         .|.||      ..:...|..|.|||||.:.|||.|||||||||||||:|||:
Zfish   171 PGHPTPPPTPVPSPHHQHSHLPGGSMKIGDRGKSKKHVDKNSTEYRLRRERNNIAVRKSRDKAKM 235

  Fly   387 RSREVEERVKSLLKEKDALIRQLGEMTNELQLHKQIYMQL 426
            |:.|.:::|..|..:.|.|.:::..:|.||:..:.|:.||
Zfish   236 RNVETQQKVIELSADNDRLRKRVEHLTRELETLRGIFRQL 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slboNP_523843.1 bZIP_CEBP 362..420 CDD:269841 28/57 (49%)
coiled coil 363..420 CDD:269841 28/56 (50%)
cebpaNP_571960.1 bZIP_CEBPA 210..270 CDD:269859 29/59 (49%)
coiled coil 212..270 CDD:269859 28/57 (49%)

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