DRSC/TRiP Functional Genomics Resources

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Protein Alignment slbo and CEBPA

DIOPT Version :10

Sequence 1:NP_523843.1 Gene:slbo / 37889 FlyBaseID:FBgn0005638 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001274353.1 Gene:CEBPA / 1050 HGNCID:1833 Length:393 Species:Homo sapiens


Alignment Length:326 Identity:84/326 - (25%)
Similarity:117/326 - (35%) Gaps:129/326 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 QQQTLRNQHGYGGRGGGG---------GAGGAL----AYMPQPVH----ATYNNSSDE--NSSVG 225
            ||:..:...|..|.||||         |.|||:    |:.|.|.:    |.|.:...|  ...||
Human   122 QQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVMPGGAHGPPPGYGCAAAGYLDGRLEPLYERVG 186

  Fly   226 SDS---STIKEEPIDPEYRRHLQEA-------------------------ASQQAAFMGNGAG-- 260
            :.:   ..||:||.:.:..:.|..|                         |:....|.....|  
Human   187 APALRPLVIKQEPREEDEAKQLALAGLFPYQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQT 251

  Fly   261 ---LYNGYGS---------------GANGLTGGGNPLNG-GNTTPSSNGSNGSTGSSNGSQFTNL 306
               |..|:.:               ||.||.|.|:.|.| |...|....|.||            
Human   252 TMHLQPGHPTPPPTPVPSPHPAPALGAAGLPGPGSALKGLGAAHPDLRASGGS------------ 304

  Fly   307 TTANVLAHHNLPHLAAAAGAHNLLKQHSKLHAQQQHQQHQQQQQHRKHSNKHVDKGTDEYRRRRE 371
                            .||                            .:.|.|||.::|||.|||
Human   305 ----------------GAG----------------------------KAKKSVDKNSNEYRVRRE 325

  Fly   372 RNNIAVRKSREKAKVRSREVEERVKSLLKEKDALIRQLGEMTNELQLHKQIYMQLMNHANPEVSR 436
            ||||||||||:|||.|:.|.:::|..|..:.|.|.:::.:::.||...:.|:.||     ||.|.
Human   326 RNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQL-----PESSL 385

  Fly   437 V 437
            |
Human   386 V 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slboNP_523843.1 bZIP_CEBP 362..420 CDD:269841 27/57 (47%)
coiled coil 363..420 CDD:269841 27/56 (48%)
CEBPANP_001274353.1 bZIP_CEBPA 315..375 CDD:269859 28/59 (47%)
coiled coil 317..375 CDD:269859 27/57 (47%)

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