DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and TUB3

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_013582.1 Gene:TUB3 / 854915 SGDID:S000004593 Length:445 Species:Saccharomyces cerevisiae


Alignment Length:455 Identity:186/455 - (40%)
Similarity:277/455 - (60%) Gaps:25/455 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQ----LERVSVYYNEASAVTRSS 61
            |||::::..||.|.|||...||:.|.||||..:| ::.|...:    .|..|.:::|      :.
Yeast     1 MREVISINVGQAGCQIGNACWELYSLEHGIKEDG-HLEDGLSKPKGGEEGFSTFFHE------TG 58

  Fly    62 GGKYVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVV 126
            .||:|||||.:||||..::.||:|.:.:||.|:..:.|:..|.||:|:||||.|.|:||.|.:.:
Yeast    59 YGKFVPRAIYVDLEPNVIDEVRTGRFKELFHPEQLINGKEDAANNYARGHYTVGREIVDEVEERI 123

  Fly   127 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 191
            ||..:.||.||||..|||||||||||:|:||:..:..||..:....::|.|:|::|.:||||||.
Yeast   124 RKMADQCDGLQGFLFTHSLGGGTGSGLGSLLLENLSYEYGKKSKLEFAVYPAPQLSTSVVEPYNT 188

  Fly   192 TLSIHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADL 256
            .|:.|..:|:.|.|:.:||||:||||.|.|.:|.||:.:||.|::..:|.||..|||.|.||.||
Yeast   189 VLTTHTTLEHADCTFMVDNEAIYDICKRNLGISRPSFSNLNGLIAQVISSVTASLRFDGSLNVDL 253

  Fly   257 RKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 321
            .:...|:||:||:||.:..:||:.|:....:.:.:|.|:|...|:..|.|..|||..|:|:....
Yeast   254 NEFQTNLVPYPRIHFPLVSYAPILSKKRATHESNSVSEITNACFEPGNQMVKCDPTKGKYMANCL 318

  Fly   322 VFRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSS--------TFIGNTT 378
            ::||.:..::|...:..|:||.:...|:|.|...|..:|..||..:..|.        ..:.|||
Yeast   319 LYRGDVVTRDVQRAVEQVKNKKTVQMVDWCPTGFKIGICYEPPSVIPSSELANVDRAVCMLSNTT 383

  Fly   379 AIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAD---DEF 440
            ||.:.:|||.::|..|:.::||:|||.||||:|.|||||.   .||.:..:.|.|..||   :||
Yeast   384 AIADAWKRIDQKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALERDYIEVGADSYAEEF 445

  Fly   441  440
            Yeast   446  445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 186/455 (41%)
beta_tubulin 2..432 CDD:276956 179/441 (41%)
TUB3NP_013582.1 alpha_tubulin 2..436 CDD:276955 180/443 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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