DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and TUB2

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_116616.1 Gene:TUB2 / 850506 SGDID:S000001857 Length:457 Species:Saccharomyces cerevisiae


Alignment Length:456 Identity:329/456 - (72%)
Similarity:394/456 - (86%) Gaps:14/456 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGGKY 65
            ||||:::..|||||||||.|||.|..|||:|.||.|.|..|:|.||::||:||||:      ||:
Yeast     1 MREIIHISTGQCGNQIGAAFWETICGEHGLDFNGTYHGHDDIQKERLNVYFNEASS------GKW 59

  Fly    66 VPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEC 130
            |||:|.:||||||:::||:...|.||||||:::|||.|||.||||||||||||||:|:||:|:|.
Yeast    60 VPRSINVDLEPGTIDAVRNSAIGNLFRPDNYIFGQSSAGNVWAKGHYTEGAELVDSVMDVIRREA 124

  Fly   131 ENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSI 195
            |.||.|||||:|||||||||||||||||||||||:|||:|.|:||:||||.|||||||||||||:
Yeast   125 EGCDSLQGFQITHSLGGGTGSGMGTLLISKIREEFPDRMMATFSVLPSPKTSDTVVEPYNATLSV 189

  Fly   196 HQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLA 260
            |||||::|||:|||||||||||.||||::.|||||||:|||..||||||.||:|||||:||||||
Yeast   190 HQLVEHSDETFCIDNEALYDICQRTLKLNQPSYGDLNNLVSSVMSGVTTSLRYPGQLNSDLRKLA 254

  Fly   261 VNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRG 325
            ||:||||||||||.|:||||:.|||.:|:|||||||||||||||||||.|||:||||||||.|||
Yeast   255 VNLVPFPRLHFFMVGYAPLTAIGSQSFRSLTVPELTQQMFDAKNMMAAADPRNGRYLTVAAFFRG 319

  Fly   326 RMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQ 390
            ::|:|||:::|..||:|||.||||||||||:||||.:.|:||.|::|||.|:|:|||||||:.:|
Yeast   320 KVSVKEVEDEMHKVQSKNSDYFVEWIPNNVQTAVCSVAPQGLDMAATFIANSTSIQELFKRVGDQ 384

  Fly   391 FSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADD--------EFDPEVNQE 447
            |||||:|||||||||.|||||:||:||||||||||||||||||||.:|        :|....||:
Yeast   385 FSAMFKRKAFLHWYTSEGMDELEFSEAESNMNDLVSEYQQYQEATVEDDEEVDENGDFGAPQNQD 449

  Fly   448 E 448
            |
Yeast   450 E 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 329/456 (72%)
beta_tubulin 2..432 CDD:276956 318/429 (74%)
TUB2NP_116616.1 beta_tubulin 2..426 CDD:276956 318/429 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 349 1.000 Domainoid score I143
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 715 1.000 Inparanoid score I88
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 1 1.000 - - otm46719
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
TreeFam 1 0.960 - -
1211.830

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