DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and TUA3

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_197478.1 Gene:TUA3 / 832097 AraportID:AT5G19770 Length:450 Species:Arabidopsis thaliana


Alignment Length:451 Identity:183/451 - (40%)
Similarity:283/451 - (62%) Gaps:16/451 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQL--ERVSVYYNEASAVTRSSGG 63
            ||||:::..||.|.|:|...||:...||||..:|:...|:.:.:  :..:.:::|..|      |
plant     1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGA------G 59

  Fly    64 KYVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 128
            |:||||:.:||||..::.||:|.|.|||.|:..:.|:..|.||:|:||||.|.|:||..||.|||
plant    60 KHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124

  Fly   129 ECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 193
            ..:||..||||.:.:::|||||||:|:||:.::..:|..:....:::.|||:||..||||||:.|
plant   125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVL 189

  Fly   194 SIHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 258
            |.|.|:|:||....:||||:||||.|:|.:..|:|.:||.|:|..:|.:||.|||.|.:|.|:.:
plant   190 STHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITE 254

  Fly   259 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVF 323
            ...|:||:||:||.:..:||:.|.....:..|:|||:|..:|:..:|||.||||||:|:....::
plant   255 FQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMY 319

  Fly   324 RGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPP--------KGLKMSSTFIGNTTAI 380
            ||.:..|:|:..:..::.|.:..||:|.|...|..:...||        ..::.:...|.|.||:
plant   320 RGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAV 384

  Fly   381 QELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEFD 441
            .|:|.||..:|..|:.::||:|||.||||:|.||:||..::..|..:|::......|||.|
plant   385 AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGGDDEED 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 183/451 (41%)
beta_tubulin 2..432 CDD:276956 178/439 (41%)
TUA3NP_197478.1 PLN00221 1..435 CDD:177802 179/439 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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