DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and Tube1

DIOPT Version :10

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0288686 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_082282.1 Gene:Tube1 / 71924 MGIID:1919174 Length:475 Species:Mus musculus


Alignment Length:464 Identity:145/464 - (31%)
Similarity:237/464 - (51%) Gaps:46/464 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEH-GIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGG- 63
            |.:.|.:|.||||||||..||::...|| .::..|||.       :.:|.::..........|| 
Mouse     1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYD-------DAISSFFRNVDTRAVGDGGS 58

  Fly    64 -------KYVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDN 121
                   ....||:|:|:|.|.:..:..||...:|.....:...||:|||||.||...|....:.
Mouse    59 ISKGRISSLKARAVLIDMEEGVVNEILQGPLRDVFDSKQLITDISGSGNNWAVGHKVFGCLYREQ 123

  Fly   122 VLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 186
            :|:.:||..|.|||||.|.:.||:|||||||:||.|:..:.:|:|:......:|.||.: .|.:.
Mouse   124 ILEKLRKSAEQCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTAVYPSSE-DDVIT 187

  Fly   187 EPYNATLSIHQLVENTDETYCIDNEALYDICF-----------------RTLKVSN--------- 225
            .|||:.|::.:|.|:.|....|||::|:||..                 ::|..||         
Mouse   188 SPYNSMLAMKELNEHADCVLPIDNQSLFDIISKIDLVVNSGKLGSAVKPKSLITSNMGAVKKHHK 252

  Fly   226 PSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 290
            ..:..:|::|:..:..:|:..||.|.||.||.::::|:||||:||:.:....||.:.........
Mouse   253 KPFDAMNNIVANLLLSLTSSARFEGSLNMDLNEISMNLVPFPKLHYLVSSLTPLYTLADVNIPPR 317

  Fly   291 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNV 355
            .:.::....|...:.:...||||..||..|.:.||.:.:.::...:..:  |.:..||.|.....
Mouse   318 RLDQMFSDAFSKDHQLIQADPRHSLYLACALIVRGNVQISDLRRNIERL--KPALQFVSWNQEGW 380

  Fly   356 KTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTG-EGMDEMEFTEAES 419
            ||::|.:||.|...|...:.|.|.::..|..:.|:|:.::::||.||.|.. :||:|..||||.|
Mouse   381 KTSLCSVPPVGHSHSLLALANNTCVKPTFMELRERFTRLYKKKAHLHHYLQVDGMEESTFTEAVS 445

  Fly   420 NMNDLVSEY 428
            :::.|:.||
Mouse   446 SLSALIQEY 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 145/464 (31%)
Tube1NP_082282.1 epsilon_tubulin 2..457 CDD:276959 144/463 (31%)

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