DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and tubb2b

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001032487.2 Gene:tubb2b / 641421 ZFINID:ZDB-GENE-030131-722 Length:472 Species:Danio rerio


Alignment Length:448 Identity:400/448 - (89%)
Similarity:429/448 - (95%) Gaps:6/448 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGGKY 65
            |||||:||||||||||||||||:||:|||||..|.|.|||||||:|::||||||      |||||
Zfish    28 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRINVYYNEA------SGGKY 86

  Fly    66 VPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEC 130
            ||||:|:|||||||:||||||:||:|||||||:||||||||||||||||||||||:||||||||.
Zfish    87 VPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 151

  Fly   131 ENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSI 195
            |:||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||:
Zfish   152 ESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSV 216

  Fly   196 HQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLA 260
            |||||||||||||||||||||||||||::.|||||||||||.|||||||||||||||||||||||
Zfish   217 HQLVENTDETYCIDNEALYDICFRTLKLTTPSYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLA 281

  Fly   261 VNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRG 325
            ||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||:|||
Zfish   282 VNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRG 346

  Fly   326 RMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQ 390
            ||||||||||||.||||||||||||||||||||||||||:||||::|||||:|||||||||||||
Zfish   347 RMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQ 411

  Fly   391 FSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEFDPEVNQEE 448
            |:||||||||||||||||||||||||||||||||||||||||:|||::|.:.|...||
Zfish   412 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEGEE 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 400/448 (89%)
beta_tubulin 2..432 CDD:276956 390/429 (91%)
tubb2bNP_001032487.2 PLN00220 28..457 CDD:215107 394/434 (91%)
beta_tubulin 29..453 CDD:276956 390/429 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.930

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