DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and TUBE1

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_057346.1 Gene:TUBE1 / 51175 HGNCID:20775 Length:475 Species:Homo sapiens


Alignment Length:466 Identity:150/466 - (32%)
Similarity:241/466 - (51%) Gaps:46/466 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEH-GIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGG- 63
            |.:.|.:|.||||||||..||::...|| .::..|||.       |.:|.::..........|| 
Human     1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYD-------EAISSFFRNVDTRVVGDGGS 58

  Fly    64 -------KYVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDN 121
                   ....||:|:|:|.|.:..:..||...:|.....:...||:|||||.||...|:...|.
Human    59 ISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLYQDQ 123

  Fly   122 VLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 186
            :|:..||..|:|||||.|.:.||:|||||||:||.|:..:.:|:|:......|:.||.: .|.:.
Human   124 ILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPSGE-DDVIT 187

  Fly   187 EPYNATLSIHQLVENTDETYCIDNEALYDICFR------------TLK----VSNPS-------- 227
            .|||:.|::.:|.|:.|....|||::|:||..:            |:|    |::.|        
Human   188 SPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSLVTSSSGALKKQHK 252

  Fly   228 --YGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 290
              :..:|::|:..:..:|:..||.|.||.||.::::|:||||:||:.:....||.:.........
Human   253 KPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYLVSSLTPLYTLTDVNIPPR 317

  Fly   291 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNV 355
            .:.::....|...:.:...||:|..||..|.:.||.:.:.::...:..:  |.|..||.|.....
Human   318 RLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQISDLRRNIERL--KPSLQFVSWNQEGW 380

  Fly   356 KTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTG-EGMDEMEFTEAES 419
            ||::|.:||.|...|...:.|.|.::..|..:.|:|..::::||.||.|.. |||:|..||||.|
Human   381 KTSLCSVPPVGHSHSLLALANNTCVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVS 445

  Fly   420 NMNDLVSEYQQ 430
            :::.|:.||.|
Human   446 SLSALIQEYDQ 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 150/466 (32%)
beta_tubulin 2..432 CDD:276956 149/465 (32%)
TUBE1NP_057346.1 epsilon_tubulin 2..457 CDD:276959 149/465 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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