DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and CG7794

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster


Alignment Length:456 Identity:149/456 - (32%)
Similarity:254/456 - (55%) Gaps:26/456 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVT----RSSGG 63
            ||:.:..||.|.||....||:...||||.:||           |::....:.|.:|    .|...
  Fly     6 EIIQIHIGQAGVQIANACWELFCLEHGILANG-----------RLTQSPMDDSFLTFFEFTSHQP 59

  Fly    64 KYVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 128
            ...||.:::|.||..::.:|:|.|..||.||..:.|:..:|:|:|:|:....:||:|..::.:|:
  Fly    60 CVQPRLVMIDTEPTVIDEIRTGSYRNLFHPDTLITGKDDSGSNFARGYNLMASELLDRSMNAIRR 124

  Fly   129 ECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRI-MNTYSVVPSPKVSDTVVEPYNAT 192
            ..:.|..|:||.:..::|||:|||:||.::.::.|::..:: :..:.|.|||.:|..:||||||.
  Fly   125 VADRCRNLRGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPSPSISPVIVEPYNAL 189

  Fly   193 LSIHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLR 257
            |:.|..::..|.::.:|||||||||..||.|..|:|.:||.:::..:|..|...||.|......:
  Fly   190 LAAHFSMDCADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGSTVSFQ 254

  Fly   258 KLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAV 322
            :|..|:||:||:|:.:..:|||......|:..::..:||.|.|...|.|..|:|.||:|:....:
  Fly   255 ELQTNLVPYPRIHYPLINYAPLVPISHSQFVNMSTAQLTGQCFQMSNQMVRCNPSHGKYMASVLL 319

  Fly   323 FRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPP---KGLKMSST-----FIGNTTA 379
            :||.::..|::..:..::...|..||:|.|...|..|..:||   .|..::.|     .|.|.|.
  Fly   320 YRGDIAPNEINTALENIKRNRSFRFVDWSPTGFKIGVSPMPPYYVPGGDLAPTNRACVAISNNTN 384

  Fly   380 IQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEA--TADDEFDP 442
            |:..:.|:..:|..:::|:||::.|.|||::|..|.||..|:..||.:|.:...:  |:..:.||
  Fly   385 IRIAWCRLVNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEVDASAPTSRRDSDP 449

  Fly   443 E 443
            |
  Fly   450 E 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 149/456 (33%)
beta_tubulin 2..432 CDD:276956 145/441 (33%)
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 145/440 (33%)
PTZ00335 6..439 CDD:185562 145/443 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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