DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and alphaTub85E

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster


Alignment Length:458 Identity:180/458 - (39%)
Similarity:269/458 - (58%) Gaps:27/458 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIY-----VGDSDLQLERVSVYYNEASAVTRS 60
            |||.:::..||.|.|||...||:...||||..:|..     ||..|   :..|.:::|..|    
  Fly     1 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGD---DSFSTFFSETGA---- 58

  Fly    61 SGGKYVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDV 125
              ||:||||:.:||||..::.||:|.|.|||.|:..:.|:..|.||:|:||||.|.|:||.|||.
  Fly    59 --GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDR 121

  Fly   126 VRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 190
            :||..:.|..||||.:.||.|||||||..:||:.::..:|..:....:|:.|:|:||..||||||
  Fly   122 IRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYN 186

  Fly   191 ATLSIHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNAD 255
            :.|:.|..:|::|..:.:||||:||||.|.|.:..|:|.:||.|:...:|.:|..|||.|.||.|
  Fly   187 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVD 251

  Fly   256 LRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVA 320
            |.:...|:||:||:||.:..:||:.|.....:..|||.|:|...|:..|.|..||||.|:|:...
  Fly   252 LTEFQTNLVPYPRIHFPLATYAPVISVEKAYHEQLTVAEITNACFEPANQMVKCDPRRGKYMACC 316

  Fly   321 AVFRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPP--------KGLKMSSTFIGNT 377
            .::||.:..|:|:..:..::.|.|..||:|.|...|..:...||        ..::.:...:.||
  Fly   317 MLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381

  Fly   378 TAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY-----QEATAD 437
            |||.|.:.|:..:|..|:.::||:|||.||||:|.||.||..::..|..:|::.     .|...|
  Fly   382 TAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGIDSTTELGED 446

  Fly   438 DEF 440
            :|:
  Fly   447 EEY 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 180/458 (39%)
beta_tubulin 2..432 CDD:276956 176/447 (39%)
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 179/455 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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