DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and alphaTub67C

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster


Alignment Length:462 Identity:183/462 - (39%)
Similarity:275/462 - (59%) Gaps:23/462 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYY------NEA-SAVT 58
            |||:|::|.||||.|||...||:...||||:.:|......:|.....|...      |:| :..|
  Fly     1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFT 65

  Fly    59 RSSGGKYVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVL 123
            .:..||.|||:|.:||||..::.||:|...:|:.|:..:.|:..|.||:|:|.|:.|.|::|.|.
  Fly    66 ETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVT 130

  Fly   124 DVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEP 188
            ..::|..|.||.||||.:.||||||||||..:||:.::..:|..:....::|.||||||..||||
  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEP 195

  Fly   189 YNATLSIHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLN 253
            |||.|:.|..::::|..:.:||||:||||..:|.|..|:|.:||.|::..:|..|..|||.|.:|
  Fly   196 YNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMN 260

  Fly   254 ADLRKLAVNMVPFPRLHFFMPGFAPLTS--RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRY 316
            .||.:...|:|||||:||.:..:|||.|  |.:.:..|:|.  ||...|::.|||..||||.|::
  Fly   261 VDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITT--LTNACFESSNMMVKCDPRAGKF 323

  Fly   317 LTVAAVFRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAV-----CDIPPKGLKMSS---TF 373
            :....::||.:..|:|:..:.|:::|....||:|.|...|..:     ..:|...|..:|   ..
  Fly   324 MACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCM 388

  Fly   374 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY----QEA 434
            :.|||||...|..:|.:|..||:::||:|||.||||:|.|||||..|:..|..::::.    .|.
  Fly   389 LSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEE 453

  Fly   435 TADDEFD 441
            ..|::||
  Fly   454 GGDEDFD 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 183/462 (40%)
beta_tubulin 2..432 CDD:276956 178/450 (40%)
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 178/445 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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