DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and betaTub56D

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster


Alignment Length:432 Identity:389/432 - (90%)
Similarity:415/432 - (96%) Gaps:7/432 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 FWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGGKYVPRAILLDLEPGTMESVRS 84
            ||||||:|||||:.|.|.|||||||||::||||||      |||||||||:|:|||||||:||||
  Fly    29 FWEIISDEHGIDATGAYHGDSDLQLERINVYYNEA------SGGKYVPRAVLVDLEPGTMDSVRS 87

  Fly    85 GPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRKECENCDCLQGFQLTHSLGGGT 149
            ||:||:|||||||:||||||||||||||||||||||:||||||||.|:|||||||||||||||||
  Fly    88 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGT 152

  Fly   150 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALY 214
            |||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||
  Fly   153 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 217

  Fly   215 DICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 279
            ||||||||::.|:||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   218 DICFRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 282

  Fly   280 TSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLAVQNKNS 344
            ||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||.:|||||
  Fly   283 TSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNS 347

  Fly   345 SYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGM 409
            ||||||||||||||||||||:|||||:|||||:||||||||||||||:|||||||||||||||||
  Fly   348 SYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGM 412

  Fly   410 DEMEFTEAESNMNDLVSEYQQYQEATADDEFDPEVNQE-EVE 450
            ||||||||||||||||||||||||||||::.:.|..|| ||:
  Fly   413 DEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEEQEAEVD 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 388/430 (90%)
beta_tubulin 2..432 CDD:276956 377/411 (92%)
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 377/411 (92%)
PLN00220 29..438 CDD:215107 380/414 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 385 1.000 Domainoid score I157
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 798 1.000 Inparanoid score I89
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 1 1.000 - - mtm983
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
1110.880

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