Protein Alignment betaTub60D and Tube1

DIOPT Version :9

• Sequence 1: NP_523842.2
• Gene: betaTub60D / 37888
• FlyBaseID: FBgn0003888
• Length: 454
• Species: Drosophila melanogaster
• Sequence 2: XP_006256590.1
• Gene: Tube1 / 361856
• RGDID: 1306048
• Length: 475
• Species: Rattus norvegicus
• Alignment Length: 464
• Identity: 144/464 - (31%)
• Similarity: 242/464 - (52%)
• Gaps: 46/464 - (9%)

  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEH-GIDSNGIYVGDSDLQLERVSVYY--------NEASA 56
            |.:.|.:|.||||||||..||::...|| .::..|||.       :.:|.::        .:..:
  Rat     1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYD-------DAISSFFRNVDTRAVGDCGS 58

  Fly    57 VTRSSGGKYVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDN 121
            :::........||:|:|:|.|.:..:..||...:|.....:...||:|||||.||...|:...:.
  Rat    59 ISKGRISSLKARAVLIDMEEGVVNEILQGPLRDVFDSKQLITDISGSGNNWAVGHKVFGSLYREQ 123

  Fly   122 VLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 186
            :|:.:||..|:|||||.|.:.||:|||||||:||.|:..:.:|:|:......:|.||.: .|.:.
  Rat   124 ILEKLRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTAVYPSSE-DDVIT 187

  Fly   187 EPYNATLSIHQLVENTDETYCIDNEALYDICF-----------------RTLKVSNPS------- 227
            .|||:.|::.:|.|:.|....|||::|:||..                 ::|..||..
  Rat   188 SPYNSMLAMKELSEHADCVLPIDNQSLFDIISKIDLVVNSGKLGSAVKPKSLITSNTGPVKKRHK 252

  Fly   228 --YGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 290
              :..:|::|:..:..:|:..||.|.||.||.::::|:||||:||:.:....||.:.........
  Rat   253 KPFDAMNNIVANLLLSLTSSARFEGSLNMDLNEISMNLVPFPQLHYLVSSLTPLYTLADVNIPPR 317

  Fly   291 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNV 355
            .:.::....|...:.:...|||||.||..|.:.||.:.:.::...:..:  |.:..||.|.....
  Rat   318 RLDQMFSDAFSKGHQLLQADPRHGLYLACALIVRGEVQISDLRRNIERL--KPALQFVSWNQEGW 380

  Fly   356 KTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTG-EGMDEMEFTEAES 419
            ||::|.:||.|...|...:.|.|.::..|..:.|:|..::::||.||.|.. :||:|..||||.|
  Rat   381 KTSLCSVPPVGHPHSLLALANNTCVKPTFLELRERFMRLYKKKAHLHHYLQVDGMEESTFTEAVS 445

  Fly   420 NMNDLVSEY 428
            :::.|:.||
  Rat   446 SLSALIQEY 454

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
betaTub60D	NP_523842.2	PLN00220	1..450	CDD:215107	144/464 (31%)
		beta_tubulin	2..432	CDD:276956	143/463 (31%)
Tube1	XP_006256590.1	PTZ00387	1..470	CDD:240395	144/464 (31%)
		epsilon_tubulin	2..457	CDD:276959	143/463 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5023
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810