DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub60D and tuba5

DIOPT Version :10

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0288686 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_997937.1 Gene:tuba5 / 337223 ZFINID:ZDB-GENE-030131-9167 Length:449 Species:Danio rerio


Alignment Length:460 Identity:181/460 - (39%)
Similarity:273/460 - (59%) Gaps:25/460 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIY-----VGDSDLQLERVSVYYNEASAVTRS 60
            |||.:::..||.|.|||...||:...||||..:|..     :|.||   :..:.:::|      :
Zfish     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGNMPSDKTIGKSD---DSFNTFFSE------T 56

  Fly    61 SGGKYVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDV 125
            ..||:||||:.:||||..::.||||.|.|||.|:..:.|:..|.||:|:||||.|.|::|.||:.
Zfish    57 GSGKHVPRAVFVDLEPAVIDEVRSGTYRQLFHPEQLISGKEDAANNYARGHYTVGKEIIDMVLER 121

  Fly   126 VRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 190
            |||..:.|..||||.:.||.|||||||..:||:.::..:|..:....:::.|:|:||..||||||
Zfish   122 VRKLTDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 186

  Fly   191 ATLSIHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNAD 255
            :.|:.|..:|::|..:.:||||:||||.|.|.:..|||.:||.|:...:|.:|..|||.|.||.|
Zfish   187 SILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVD 251

  Fly   256 LRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVA 320
            |.:...|:||:||:||.:..::|:.|.....:..|:|.|:|...|:..|.|..||||||:|:...
Zfish   252 LTEFQTNLVPYPRIHFPLVTYSPIISAEKAYHEQLSVSEITSACFEPSNQMVKCDPRHGKYMACC 316

  Fly   321 AVFRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPP--------KGLKMSSTFIGNT 377
            .::||.:..|:|:..:..::.|.|..||:|.|...|..:...||        ..::.:...:.||
Zfish   317 MLYRGDVVPKDVNAAIANIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381

  Fly   378 TAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEFDP 442
            |||.|.:.|:..:|..|:.::||:|||.||||:|.||:||.   .||.:..:.|:|..||...|.
Zfish   382 TAISEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGADSTEDG 443

  Fly   443 EVNQE 447
            |..:|
Zfish   444 EEGEE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 181/460 (39%)
tuba5NP_997937.1 PTZ00335 1..449 CDD:185562 181/460 (39%)

Return to query results.
Submit another query.