DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and gtb1

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_596147.1 Gene:gtb1 / 2540223 PomBaseID:SPBC32F12.04 Length:446 Species:Schizosaccharomyces pombe


Alignment Length:452 Identity:157/452 - (34%)
Similarity:264/452 - (58%) Gaps:24/452 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGGKYV 66
            |||:.|||||||||||::||:.:..||||..:|.....:...::|..|::.:      |...:|:
pombe     3 REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFATEGVDRKDVFFYQ------SDDTRYI 61

  Fly    67 PRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQS--GAGNNWAKGHYTEGAELVDNVLDVVRKE 129
            |||||:||||..:.::.|..||.|:.|:|.:..::  |||||||.| |:....:.::::|::.:|
pombe    62 PRAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANG-YSHAERIFEDIMDMIDRE 125

  Fly   130 CENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVP-SPKVSDTVVEPYNATL 193
            .:..|.|:||.|.||:.||||||:|:.|:.::.:.||.:|:.||||.| |..|||.||:|||:.|
pombe   126 ADGSDSLEGFSLLHSIAGGTGSGLGSFLLERLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLL 190

  Fly   194 SIHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 258
            ::.:|..|.|....:||.||..|....|...||::...|.|||..||..||.||:||.:|.||..
pombe   191 ALKRLTLNADSVVVLDNAALAHIAADRLHTQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVS 255

  Fly   259 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL---TVPELTQQMFDAKNMMAACDP-RHGRYLTV 319
            :..:::|.||.||.:..:.|.|::..::.:|:   ||.::.:::...||.|.:.:| :...::::
pombe   256 IIASLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFISI 320

  Fly   320 AAVFRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPP---KGLKMSSTFIGNTTAIQ 381
            ..:.:|.....:|.:.:|.::.:..:.|:.|.|.:::.|:....|   ...::|...:.|.|:|.
pombe   321 LDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGLMLANHTSIA 385

  Fly   382 ELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMN---DLVSEYQQYQEATADDEF 440
            .||||..:|:..:.:|.|||..|..|.:.|.:..|.:|:.:   ||::||    ||..|..:
pombe   386 SLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRDVVADLINEY----EACEDPNY 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 157/452 (35%)
beta_tubulin 2..432 CDD:276956 154/442 (35%)
gtb1NP_596147.1 PLN00222 1..444 CDD:215108 157/452 (35%)
gamma_tubulin 3..435 CDD:276957 152/438 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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