DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and tba-9

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_508555.2 Gene:tba-9 / 185538 WormBaseID:WBGene00006535 Length:456 Species:Caenorhabditis elegans


Alignment Length:451 Identity:176/451 - (39%)
Similarity:276/451 - (61%) Gaps:17/451 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQL--ERVSVYYNEASAVTRSSGGK 64
            ||::::..||.|.|:|...||:...||||..:|:...:..|.:  :..:.:::|..|      ||
 Worm     7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA------GK 65

  Fly    65 YVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRKE 129
            :|||||::||||..::.:|:|.|..||.|:..:.|:..|.||:|:||||.|.|::|.|:|.||:.
 Worm    66 HVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRL 130

  Fly   130 CENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLS 194
            .|||..||||.:.||.|||||||...||:.::..:|..:....:.:.|:|:||.::|||||:.|:
 Worm   131 VENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSILT 195

  Fly   195 IHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKL 259
            .|..:|::|.::.:||||:||||.|.|.::.|:|.:||.|::..:|.||..|||.|.||.||.:.
 Worm   196 THTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTNLNRLIAQVISSVTASLRFDGALNVDLTEF 260

  Fly   260 AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFR 324
            ..|:||:||:||.:..:||:.|.....:..:||.|:|||.|:....|..||||.|:|:....::|
 Worm   261 QTNLVPYPRIHFPLTTYAPIISAEKAYHEQMTVAEITQQCFEPGAQMVKCDPRRGKYMACCLLYR 325

  Fly   325 GRMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPP--------KGLKMSSTFIGNTTAIQ 381
            |.:..|:|:..:.:|:.|.|..||:|.|...|..:...||        ..|:.:...:.|||||.
 Worm   326 GDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLSNTTAIA 390

  Fly   382 ELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY-QEATADDEFD 441
            |.:.|:..:|..|:.::||:|||.||||:|.||:||..::..|..:|::. .:|...||.|
 Worm   391 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDAGEPDEED 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 176/451 (39%)
beta_tubulin 2..432 CDD:276956 172/440 (39%)
tba-9NP_508555.2 PTZ00335 7..453 CDD:185562 176/451 (39%)
alpha_tubulin 7..440 CDD:276955 172/438 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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