DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub60D and tba-5

DIOPT Version :9

Sequence 1:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_492268.1 Gene:tba-5 / 184569 WormBaseID:WBGene00006531 Length:447 Species:Caenorhabditis elegans


Alignment Length:456 Identity:183/456 - (40%)
Similarity:276/456 - (60%) Gaps:18/456 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGGKY 65
            |||||::..||.|.|||...||:...||||..:|:...|:...:|..|  ||...:.|.|  ||:
 Worm     1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQS--YNTFFSETPS--GKH 61

  Fly    66 VPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEC 130
            |||||.:||||..::.||:|.|.:||.|:..:.|:..|.||:|:||||.|.||:|.|:|.||:..
 Worm    62 VPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLT 126

  Fly   131 ENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSI 195
            |.|..||||.:.||.|||||||..:|::.::..:|..:....:|:.|:|::|.::|||||:.|:.
 Worm   127 ERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYNSLLTT 191

  Fly   196 HQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLA 260
            |..:|::|.::.:||||:|:|....|.|.:|:|..||.|::..:|.:|..|||.|.||.||.:..
 Worm   192 HTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHLNRLLAQVVSSITASLRFDGALNVDLTEFQ 256

  Fly   261 VNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRG 325
            .|:||:||:||.:..:||:.|.....:..|:|.|:|...|:..:.|..||||:|:|:....::||
 Worm   257 TNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEITNVCFEPGSQMVKCDPRNGKYMACCLLYRG 321

  Fly   326 RMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPP--------KGLKMSSTFIGNTTAIQE 382
            .:..||::..:..::.|.:..||:|.|...|..:...||        ..|:.:...:.|||||||
 Worm   322 DVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSNTTAIQE 386

  Fly   383 LFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEFDPEVNQE 447
            .:.|:..:|..|:.::||:|||.||||:|.||:||..:|..|..:|    |....|.|||  |.|
 Worm   387 AWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY----EEVGVDSFDP--NDE 445

  Fly   448 E 448
            |
 Worm   446 E 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 183/456 (40%)
beta_tubulin 2..432 CDD:276956 174/437 (40%)
tba-5NP_492268.1 PTZ00335 1..446 CDD:185562 181/454 (40%)
alpha_tubulin 2..435 CDD:276955 175/440 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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